Vibrio cholerae O27 10432-62: VAB027_2119
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Entry
VAB027_2119 CDS
T03829
Name
(GenBank) type I secretion system ATPase family protein
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAB027_2119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcz02000
]
VAB027_2119
02044 Secretion system [BR:
vcz02044
]
VAB027_2119
Transporters [BR:
vcz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VAB027_2119
Secretion system [BR:
vcz02044
]
Type I secretion system
RTX toxin transporter
VAB027_2119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_16
SMC_N
AAA_22
AAA_18
AAA_29
AAA_21
MeaB
ABC_ATPase
PRK
Rad17
Tmemb_9
nSTAND1
RsgA_GTPase
AAA_30
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AKB05524
LinkDB
All DBs
Position
complement(2280278..2282443)
Genome browser
AA seq
721 aa
AA seq
DB search
MNTRFTTDAHRLAEQTLPQESPRTNWGIEAVVYAGQQFHKKSTSSQLKHALGVSHANLTD
MEMREAADYLGLKSQITKLSIQAFKTLPLPALIEYQGGWKVMIQTDDNGWTAYDPATDSL
HTLSFTSAESTAHYKVMLIADESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIF
ALVSPMLFENVIDKVLVGQSLSSLHVLALAMLGLAIAEPAYSYLRNTVFGHLASQVNAEL
SGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMF
HYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTA
TEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITP
GQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPELDG
GIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQV
LVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALA
FIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMS
NMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccgttttacaaccgacgctcataggcttgctgaacaaacgttaccacaagag
tctccaagaactaattggggtatcgaagctgtggtctacgcaggtcagcaatttcacaaa
aaatcgaccagctcgcaactgaaacacgcgctaggggtaagccacgccaatctcactgac
atggaaatgagagaggccgccgactatcttggtctgaaaagccaaataacaaagctcagt
attcaagcgttcaagacgctgccactccccgctcttatcgaatatcagggtggctggaaa
gtgatgatccaaaccgatgataacggttggacggcctacgatcctgcaaccgactctctg
cacacactctcgttcacatcggctgaatccaccgcgcattacaaagtcatgcttattgcg
gatgagtctctgagcgtcaaagaggtcaaatttggtttaagctggttcgccccttccatt
cttcgtcaaaaaagccaactgcgagatgtgtttctttacgccatcgcgctacagatattt
gcgctggttagcccgatgctgtttgaaaatgttatcgataaagtgctcgtgggacaaagc
ctatcaagcttgcatgtgctggcgctggcgatgttagggttagcgatagctgagccagca
tacagctatttacgcaataccgtatttggccatcttgcaagccaagtgaatgccgagctg
tcaggccgactctatcggcacttagtcggtctgccattaacctatttcaagcagcgtcaa
actgggcaaatcattgcacgagtgcgtgaaatggcgcaaatccgtcagtttctgacgggt
tcgactttaatgctattgcttgatctgatttttgtgacggtttttctcgctgtcatgttc
cattacgccagtacactgacttggttagtgattggctcgcttgtgatttattttgtgttg
tggttgattgcaggaccgctgatccgcaaaaaagtggaatctgaatacgagtccgacgct
aatgccacgacatttttgaccgaagccgttaccggtattgaaaccatcaaaacgaccgca
acggagcatcgctttctcgagcagtggcaacgcattcttagccagcaactaaaccgtagc
tttgatgcacaaaaatcggggctcatcgctgggcaagctatcgctctggttcagaagctg
acggcggcactgctgctttggtggggcgtgagcgcggtactcaaaggtgaaatcactccc
ggtcagttagtagccttcaatatgctcgccggccatgtgactcagccagtcctgcgactg
gcacaaatttggcaggattttcagcacactcttatcgcgctgagacgggttggcgatatt
ctcgatgaaccgagagaaaacagtaaacaaggcttagcgtccgtgcccgaactcgacggt
ggcattgagtttagtaacattcgctttcgttaccaccaagatgcccctgaggtactggcc
aatctatcactcaagatcaaaccggggcaatttatcggcgttactggaccatcaggttca
ggcaaaagcacactcactcgcctgctgcaacgcttgtacgttccgcaacatggccaagtg
ctggtggatggaatggatcttgcgattgcggatcccgtgtctctgcgccgcaatatgagt
gtggtactacaagagagcattcttttttccggaagtgtggcggacaatattcgtttatgt
aaaccgcaagccagcgatgaagaaatccgtcatgccgctcaattagcaggtgcgttagca
tttattgaaggacttccccacggttttaaccaaccggttggggaaaaaggtgcagcgctt
tcgggaggtcaaaggcaacgtatcgccttagcgagagccttgctggtcaatcctagaatc
ttactgctagatgaagcgacctctgctctcgactacaattctgaagcgtcaataatgagc
aatatggatgaaatatgtcgtggtcgcactgtgatcagtattgcccatcgcctcaatacc
atccgccatgctgacaacatctttgtcttggataaaggacaagtcgccgaaagcggtaca
catgaggaactgcttgcccagcaagggctgtacgccaaactttggacgcaacaagtggga
gaatag
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