Vibrio cholerae O27 10432-62: VAB027_2283
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Entry
VAB027_2283 CDS
T03829
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_2283
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VAB027_2283
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
DZR
AAA_22
DUF7577
zf-tcix
AAA
Zn_ribbon_3
MgtE_N
P-loop_SecA
AAA_16
AAA_30
T1R_D3-like
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AKB05089
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Position
2483957..2485741
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AA seq
594 aa
AA seq
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MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHR
VPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC
IFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI
VAQIIELAKVRQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETG
EREHCGYRFRAKYCNECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECTDMS
LKVHKDAKGKSQLQVTYHGQDAVQVHQFWSLNTPRQKQQFHDQFVRPHLADKHRPFEAAT
PAKVVDHQHRFRPPLFVIARKSGRFWAIRDKVFADEFVSPTDVHLSNRAYTLPT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgttacgaccttatcaagccgactcagtgaaagccgtcgtgcactattttcgc
cagcactctaccccggccgtgattgtgctcccgaccggcgcaggaaaaagcttagtgatc
gcagagctggcgcgccttgcccgtggccgcgtattggtgttggcccatgtcaaagagttg
gttgagcaaaaccacgccaaatatgaaggctatggcttaactggcgcgattttttccgca
ggcttggggcgcaaagaaaccgatcaacaagtggtgtttgcctcagtgcaatcggtggtg
cgcaacttatctgagttccaaaaccagttctctttattggtgattgatgagtgccaccgc
gtccccgatgacaaaaacagcagttatcaaaaagtgatcacccatttgctggaactcaat
ccgggcatgaaagtgctcggactgaccgcaaccccctatcggctcgggatgggatggatt
taccagtatcacacccgtggtttagtgcgcagtgaagagccgcgttttttccgcgactgt
atttttgagctacccattcactatttattggatgaaggttttctcacccccgctcaattg
attgatacccctgtcatgagctatgacttttcgcagttgaaaccagccaatacggggcgc
tatcgtgaatcagaactcgacttggtgattgagcagtcacagcgcgccactccgcaaatt
gttgcccagatcatcgagcttgccaaagtgcgacaaggggtgatgatttttgcagcgacc
gtgcgtcacgctgaagagatctaccgtttactgcctaccgaacacgctgctttagtgatc
ggtgataccccaacgccagagcgtgatcgcattatccaagcgttcaaacagcaacagatt
aagtttttggtcaatgtttccgtactcaccaccggatttgatgcgccgcatgtcgatttg
attgcgattttaaggccaacggaatcggtcagtctctatcaacaaattgtcggccgcggg
ctacgccttgcggcgggcaaatccgactgtttggtgctcgactatgcgggtaatcagtac
gatctgtatcaacctgaagtgggcgatccaaaacccgattcagacagcgaaatcatcacc
attccctgccccgcttgcggttttaacaataacttttggggcaagctggatgcgaacggc
tttctgattgagcactatggccgccgctgccaaggctatttcaccgatgatgagacgggt
gagcgcgagcattgtggctaccgttttcgtgccaaatactgcaatgaatgtggtgcggat
aacgacatcgccgctcgcatctgccatgagtgtgacgccacgttagtggaccccgataag
aaactcaaagaggcactcaatcttaaagatgcgctggtgtttgaatgtaccgacatgagc
ctaaaagttcataaagacgccaaagggaaaagccagcttcaagtgacttaccacgggcaa
gatgcggtgcaagtacaccaattttggtcactgaatacgccgcgccaaaagcagcaattt
cacgaccaatttgtacgtccacatctggctgacaaacatcggccttttgaggcagcaacg
cccgccaaagttgtggatcatcagcaccgttttcggccacccctgtttgtgattgcgcga
aaatcgggccgcttttgggccattcgcgacaaagtatttgccgatgagttcgtctcccca
accgacgttcacttatcaaaccgagcttatacccttcctacttga
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