Vibrio cholerae O27 10432-62: VAB027_2373
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Entry
VAB027_2373 CDS
T03829
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcz03032
]
VAB027_2373 (topA)
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_2373 (topA)
Enzymes [BR:
vcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VAB027_2373 (topA)
DNA replication proteins [BR:
vcz03032
]
Prokaryotic type
DNA Topoisomerases
VAB027_2373 (topA)
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VAB027_2373 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
MetOD1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AKB05787
UniProt:
A0A5C9SSU4
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Position
complement(2591446..2594076)
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AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQTATPTGKAAAASTKKAST
TDKEQQKREKERAALIKKMGVDPYHGWQANYQILPGKEKVVAELQKLAKDADSVYLATDL
DREGEAIAWHLREIIGGDEKRYKRVVFNEITKNAIQQAFKQPGELNMDGVNAQQARRFMD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDINADTLTADKQ
DFRLLVAQKDGLAFKPVNETEALAAVAALNKAQYEVCKREDKPTTSKPSAPFITSTLQQA
ASTRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVENLRGYITKHYGEAYLPSQP
NVYGSKQNAQEAHEAIRPSDVTVTADDLEGMEADAHKLYALIWNQFVACQMTPAQYDSTT
VSVKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPPVKVGDSLKLVSLDPKQHFTKP
PARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFFAEKMGEIVTDRLDEN
FDDLMNYDFTARMEEKLDQIAEGEVNWTAVLDEFFADFSRDLETAEQDESLGGMKPNHIV
MTNILCPTCSRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGVINVLEEDVETA
ALRAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCEGFIVEEGEFKVKGYEGPTVECDKC
GSDMVLKNGRFGKYMGCTNDACKNTRKILKNGEVAPPKEEPVHFPELPCENSDAYFVLRD
GASGLFFAASNFPKSRETRAPLVEELKRFAERLPEKYQYLTSAPAHDPDGLPAVVRFSRK
EKEHYVRTETEGKPSGWMAVYQEGKWLVTDKRKNAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatcgtcgagtcgccagccaaggctaaaaccatcaataagtac
cttggtaaagactttatcgtgaaatccagtgtgggacacgtgcgtgatctgcctacagca
gggcaaacggccacaccgaccggtaaagcggcggcagcatcgactaagaaagcatctact
actgataaagagcagcaaaagcgtgaaaaagaacgcgcagcgctgatcaaaaagatgggt
gtcgatccgtatcacggctggcaagccaattaccaaattctgcccggtaaagagaaagtg
gtggctgagctgcaaaagctcgcgaaagacgctgacagcgtttatctcgcaaccgacttg
gaccgcgagggagaagccatcgcttggcaccttcgtgagatcatcggtggcgatgaaaag
cgatataaacgagtggtatttaacgaaatcaccaaaaacgccattcagcaggcttttaag
cagcctggtgaactgaatatggatggcgtgaacgctcaacaagcacgccgtttcatggac
cgtgtggtgggctttatggtatcgccattgctgtggaaaaaagtggcgcgtggcctttct
gctggtcgcgtacagtctgtcgccgtgaaacttctggttgagcgtgaacgcgaaatcaaa
gcgtttgttccggaagagttttgggacatcaatgccgataccttgaccgcagacaagcaa
gattttcgcctgttggtggcccaaaaagacggtttagctttcaagcccgtgaacgaaacg
gaagccttggcggcggttgctgcgctcaataaagcgcagtacgaagtgtgcaaacgcgaa
gacaaaccgaccaccagtaaaccgagtgcgcctttcattacgtcaaccctgcagcaagct
gcgagtactcgccttggctatggggtgaaaaagaccatgatgctcgctcagcgcttgtat
gaagcgggttacatcacctatatgcgtaccgactcaaccaacttgagtgcggaagcggtc
gagaatctgcgtggctacatcaccaagcattacggtgaggcgtatttgccaagccagcca
aatgtgtatggcagcaagcaaaatgcccaagaggcgcacgaagcgattcgtccttcggat
gtgactgtcaccgccgacgatctggaaggaatggaagcggatgcacacaagctgtatgcc
ctgatttggaatcagtttgtggcttgtcaaatgacacctgcgcaatacgattccacgaca
gtcagtgtaaaagcggcagagtacaccctgaaagcgaaaggtcgtatcctcaagtttgat
ggttggactcgcgtacagcgcccgttgggtaaaaacgaagatcagatcctgcctccggtg
aaggtcggtgatagcctaaagctcgtcagcctagatccgaaacagcactttaccaaaccg
ccagcgcgttacacggaagcggcattggtgaaagagttggaaaagcgtggcattggtcgc
ccatcgacgtatgcatcgatcatttccaccattcaagaccgtggctatgtgaaagtcgat
cagcgccgtttcttcgcggaaaaaatgggtgaaattgtcaccgatcgtcttgatgagaat
tttgacgacttgatgaactacgactttaccgcgcgtatggaagagaaactcgaccaaatc
gccgaaggtgaagtgaactggacagcagttctggatgagttctttgctgatttcagtcgc
gacctcgaaacggcggagcaagatgaaagcttaggtggcatgaagcctaatcacatcgtg
atgaccaatattttgtgtccgacctgttcgcgtccgatggggatccgcacggcatcgaca
ggggtgtttttaggctgttctggttatgcattaccgccgaaagagcgctgcaaaaccacc
atcaacttaggtgacgaagaaggggtgatcaacgttctcgaagaggatgtcgaaaccgca
gcactgcgtgctaagaagcgttgcccaatttgtgaaacggcgatggatgcgtatctgatt
gacgataagcgtaagctgcatgtttgtggtaacaatccgaactgtgaaggctttatcgtt
gaagaaggcgagttcaaagtcaaaggctatgaaggcccaaccgtcgagtgtgataaatgt
ggctcagacatggtgctgaaaaatggccgctttggtaagtacatgggttgtaccaacgat
gcttgcaaaaatacgcgtaagatcctgaaaaatggcgaagttgcgccaccgaaagaagag
ccagtgcatttccctgaactgccttgtgaaaattcggatgcgtattttgtgctgcgtgat
ggtgcatctggcttgttctttgcggcgagcaatttccctaaatcgcgtgaaacgcgcgcg
cctttggtggaagagttgaaacgttttgctgagcgtttgccagaaaaataccagtatctg
acttctgcacccgcacatgaccctgatggcttacctgctgtggtgcgcttctctcgtaaa
gagaaagagcattacgtgcggaccgagacagagggtaaaccttccggttggatggcggtt
taccaagagggtaaatggttggtcacggataaacgcaaaaacgcgaaataa
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