Vibrio cholerae O27 10432-62: VAB027_244
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Entry
VAB027_244 CDS
T03829
Name
(GenBank) transcriptional regulator PadR-like family protein
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz02024
Quorum sensing
vcz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAB027_244
05111 Biofilm formation - Vibrio cholerae
VAB027_244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcz03000
]
VAB027_244
Transcription factors [BR:
vcz03000
]
Prokaryotic type
Helix-turn-helix
PadR family
VAB027_244
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Gene cluster
GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AKB08552
UniProt:
Q9X399
Structure
PDB
PDBj
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All DBs
Position
complement(258111..258650)
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQ
EGKPDRKVYSITQAGRSALGEWFDQPTAHPTVRDEFSAKLMACSVQSAEPYRLQLAELVE
ESRKLVAHYQEIEAAYYANPAVLDKQQRLERLTLRRNLLVRQAWIQWADEVLAELNAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgttatccttactgttcttagcacacgcgatgcaaccggatacgat
ataaccaaagagttttctgctagcattggctacttctggaaagccagccatcagcaggta
tatcgtgaactcaataaaatgggggaacagggtttagtgacttgtgttctggaaccacag
gaaggcaaaccagatcgcaaggtttattctataacccaagctggccgcagcgctttaggt
gagtggtttgatcaaccaaccgcacacccaactgtgcgtgatgagtttagtgcgaaattg
atggcttgttcagtgcaatcggcagaaccttaccgtctgcaactggctgaactggttgaa
gaatcgcgtaaactggtcgctcactatcaggaaatcgaagccgcttattacgctaaccca
gccgtgttagacaagcagcaacgtttagagcgtttaacgctacgtcgtaatttactggtt
cgccaagcatggattcaatgggcggacgaagtgttggcagaattgaacgcgatggcataa
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