Vibrio cholerae O27 10432-62: VAB027_270
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Entry
VAB027_270 CDS
T03829
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vcz
Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcz03009
]
VAB027_270 (rimO)
Enzymes [BR:
vcz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VAB027_270 (rimO)
Ribosome biogenesis [BR:
vcz03009
]
Prokaryotic type
ribosomal protein modification factors
VAB027_270 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AKB07885
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Position
complement(289764..291176)
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AA seq
470 aa
AA seq
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MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEG
YEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHP
NVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPV
RHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMM
KRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFK
YSPVEGAAANEIEEQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLVDEVDEEGA
IGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSVLHDAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcagacttttacgccaaatcaaaccacgacactggaaacggcgaaaaaaacc
atcgccgagcaaagccaaaatagccaaaccacaggcaataaaattggctttgtttcctta
ggttgcccaaaaaacttagtggattcagaacgcattctgacccaactacgcactgagggg
tatgagatcgtcaacagctaccacgactccgatgtggtgatcgtcaacacctgtggtttt
atcgacagtgcggtgcaagagtctctggataccattggcgaagcgctgaaagagaacggc
aaagtgattgtgacgggctgcctcggcgcgcgtgaagatgaaattcgccaagtgcacccc
aatgtgctcggtattacagggccacacgcttaccaaaacgtattggagcacgtacaccaa
tacgcgccaaagccagcccacaacccttttaccagcttagtgccggatcacggggtgaaa
ctgacgccaaagcattacgcttacctgaaaatttctgaaggttgtaaccaccgctgtact
ttctgcatcatcccttcaatgcgtggtgatttggtaagccgcccagtgggtgaaattatt
ggtgaagcggaacgcctgaaaaatgcgggcgtaaaagagctgctcgtaatcagccaagac
accagcgcttacggtgtggataccaaacacagcctaggttttgccaacggctcaccggtg
cgccacaacatcaaagcgctcagtgaagagcttggcaaaatgggcatttgggttcgtctg
cactacgtttacccttacccacatgtggatgaaatcatcccattgatggcagaaggaaaa
gtgctgccttacttggatattccattccaacacgccagccctcgtgttctgaaaatgatg
aagcgcccggggcaagcggagcgcactttagagcgcatcaaaaaatggcgtgaaatctgc
ccagaactggtgatccgctccacctttattgtgggcttcccgggcgaaactgaagaagat
ttccaaatcctgctcgattggctgaaagaagcacaactcgatcgcgtcggctgctttaag
tattcgcccgttgaaggcgctgcagcgaacgagattgaagaacagatcccagaagacgtg
aaacaagatcgtttcgagcgctttatgctcgtgcagcaagagatcagtgctgccaaactg
caaaaacgcatcggcagcaccatgcaagtgctggttgatgaagtcgatgaagaaggcgcg
atcggccgtacttacgccgatgcaccggaaattgatggcttggtttacctcaacggtgaa
accaacctgaaaccgggagagctggttaacgttgtgattgaacacgccgatgaatacgac
ctatggggcagcgtactgcacgacgcgcagtaa
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