Vibrio cholerae O27 10432-62: VAB027_2767
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Entry
VAB027_2767 CDS
T03829
Name
(GenBank) bacterial regulatory, Fis family protein
KO
K10943
two-component system, response regulator FlrC
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz02020
Two-component system
vcz02040
Flagellar assembly
vcz05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAB027_2767
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAB027_2767
09142 Cell motility
02040 Flagellar assembly
VAB027_2767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vcz02022
]
VAB027_2767
02035 Bacterial motility proteins [BR:
vcz02035
]
VAB027_2767
Two-component system [BR:
vcz02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
VAB027_2767
Bacterial motility proteins [BR:
vcz02035
]
Flagellar system
Flagellar assembly proteins
Others
VAB027_2767
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
AAA_16
MCM
HTH_20
MerR
HTH_24
HTH_11
AAA_7
AAA_19
HTH_28
FleQ
DUF2089
AAA_3
HTH_5
AAA
HTH_Crp_2
Sigma70_r4_2
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AKB07823
LinkDB
All DBs
Position
complement(3011472..3012905)
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AA seq
477 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGM
GGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKEGP
FIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWPAL
RERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALILS
ENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVAEPELFKPLVQGGGQNSSSQ
SSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtcttaatcgtagaagatgacgaaggtcttcgcgaagcgttgatc
gacaccttagctttagcgggttatgagtggctggaagccgattgtgcagaagatgccctg
ctcaaactcaaatcacacagtgtcgatattgtggtgtctgatgtacaaatggcaggcatg
ggtggactcgctctgctgcgcagtatcaaacagcactggccgaatttacccgtactgctg
atgaccgcttacgccaatattcaagatgccgtatctgccatgaaagatggcgcgattgac
tacatggctaagccttttgcaccagaagtgctgctgaatatggtcagccgttacgcgcca
gtaaagtcagatgacaacggcgatgctgtggtcgcggatacgaaaagcctcaagctgctt
gccttagccgataaagtggcgaagactgatgccaacgtgatgattttggggccaagcggc
tcaggtaaagaagtgatgtcacgttacatccacaatgcctctcctcgtaaagaggggcca
tttattgcgattaactgcgcggcaattcctgacaacatgttagaagcaacactgttcggt
tatgaaaaaggcgcgtttaccggagccgtacaagcgtgtcccggtaagtttgaacaagcc
caaggtggcaccattttgctcgatgagatcagcgaaatggatctcaatctgcaagccaaa
ctgctgcgagtactgcaagagcgtgaagtggagcgcttagggagccgcaaaagcatcaag
ctcgatgtgcgcgtgctcgcaaccagtaaccgtgacttgaaacagtacgtgcaagccgga
catttccgtgaagacctgtactaccgtttgaatgtgttcccattaacctggccagccttg
cgtgaacgtaaagacgatattgagccgctggctaaccatctgattgagcgtcactgcaaa
aagttaggtttacctgtaccaagcattgcgcctaacgccattactaaactgctgaattac
ccatggccgggtaatgtgcgcgagctggataacgtcgtgcagcgtgctttgatcttaagt
gaaaacggccatattcaaagtgagcacatcttgctggaaggggttgattggcatgatgcc
agcagcttacagcaagcggtggcgggagagtcgatggctgcgccgcagatcaaacctgtt
gcagagcccgaactgtttaagcccttagtgcaaggtggtgggcaaaacagtagttcgcaa
agttcaggtttggggggtgagctgcgcgaccaagagtttgcgattattcttgatacgttg
gccgaatgtcagggacgccgtaaagagatggcggagaagctaggtattagcccacgcact
ttacgttacaaactcgccaaaatgcgtgatgcagggattgatatccccggttga
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