KEGG   Vibrio cholerae O27 10432-62: VAB027_2954
Entry
VAB027_2954       CDS       T03829                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
vcz  Vibrio cholerae O27 10432-62
Pathway
vcz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VAB027_2954 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcz03400]
    VAB027_2954 (recB)
Enzymes [BR:vcz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     VAB027_2954 (recB)
DNA repair and recombination proteins [BR:vcz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VAB027_2954 (recB)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 SLFN-g3_helicase AAA_11 WHD_ORC2 AAA_25 AAA_12
Other DBs
NCBI-ProteinID: AKB08383
LinkDB
Position
complement(3193562..3197188)
AA seq 1208 aa
MSADSNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGCAETRHAHPLS
VDQILVVTFTEAATAELRDRIRRRLHDARLAFARGASEDPLLRSLLAEFTDHSLAVSLLL
NAERQMDEAAIFTIHGFCQRMLTQNAFESGSRFENEFVTDESRLKAQVVADYWRRQFYPL
PISLANEVRRLWPAPSALLAEIAGYLSGPPVKLTTPLMEGDLAALQQAQIARISEIKQHW
LAEREEIEPAVTGSDLHKNSQNALLRRLPILDAWAQSETQDLQVPSELEEFTQSGLLAKS
KKGNPPQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAKAKSTHHWLSFDDLLTQLS
AALDNDEQGLLGERIRSLYPVAMIDEFQDTDPLQYSIFSRLYLDYPQCGLLMIGDPKQAI
YAFRGADIFTYIKARNQVSAHYTLGTNWRSSAAMVAAVNQVFSSATHPFIYSYDIPFQPV
AASPGADKRHWSLEGQVQPALTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASG
AAIFHRGEAIEAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERL
LLAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEFRQYRRLWSERGVLP
MLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATREIDSDQGLLRFLTQAMADAA
QGLGGSDEQIQRLESERRLVQIVTIHKSKGLEYPLVFLPFVMSYRESSEGKYYDVESATT
WVDLTGNEEALAKADQERLAEDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSA
MGFLLQDGQESGIADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQ
AIDRRWRVTSYSGLVMQSSHARHDPLQELPLLEVGGFDLDSAQERDGAALESVERSIFNF
PRGARPGTFLHSLFEEVDFQQSAHSEPNTKIILELMESEQIESEWLPVLQHLVDTVLSTP
LDGKALRLQQIMAAQRLTELEFLLPIEVLDAPTLNRITQRHDPLSAHAGDLGFHAVQGML
KGFIDLVFQYQGRYYVLDWKSNHLGDDPAAYHPQRLGSAMADHRYDLQYQIYALALHRFL
RSRLAHYNYEQHFGGVFYLFLRGMDGRTDQGVFHTKPSLALLDELDGLIAGRELAQRASK
AGQMELDL
NT seq 3627 nt   +upstreamnt  +downstreamnt
atgagtgccgattcaaataagctggctgttacgctcgatacgttgcgctttcctttgcat
ggagcgcggctgattgaagcctcggcaggtaccggaaaaacctacaccattgccggactc
tatctgcgtctggtgcttgggcatggttgcgcggaaactcgccacgcgcatccactgagt
gtggatcaaattctggtggtgacttttaccgaagcggccaccgcagagctgcgtgaccgt
attcgtcgccgcttacacgatgcgcgcctcgcctttgcccgcggtgcgagtgaagatccg
ctgcttcgctccctgctggctgaatttaccgatcacagcctagccgtctctttgctactc
aatgccgagcggcagatggatgaagcggccatttttaccatccacggtttttgccaacgc
atgctgacgcaaaatgcgtttgaatcgggcagtcgctttgaaaatgaattcgtcaccgat
gaaagtcgcctcaaagcgcaagtggtggccgattattggcgtagacagttctatcccttg
cccatttctctcgcgaacgaagtacgccgcttatggccggcgccttctgcgctgttggct
gagattgccggttatctttctgggccgccagtcaaactgaccacgcctttaatggaagga
gatttggccgcgctgcaacaagcgcagatagcgcgcattagcgagattaagcagcactgg
ttagcggagcgagaggagattgagcctgccgtaactggctctgacctgcacaaaaatagc
caaaatgcgctgctgcgccgtttaccgattctggatgcttgggcgcaaagtgaaacgcaa
gatctgcaagtgccgtcagagcttgaagagttcacccaaagcggattgcttgccaaatca
aagaaaggcaatccgccacaattagcgctgtttgaacgaatagaagcatttcttgctgag
cctgtgtcactcaaaacaccgcttttggtgcatgcgattcatcactgtcgtcactggttg
gcgaaagccaaatccacccatcattggctctcgtttgatgacttactgactcaactcagc
gctgcgctcgataatgatgagcaagggctattgggcgagcggatccgctcgctgtatccg
gtggcgatgatcgacgaattccaagataccgatccgctgcagtacagcattttcagtcgg
ctgtatctggactatccgcagtgtggcttgttgatgatcggcgacccgaaacaggcgatt
tacgccttccgtggcgccgatattttcacttacatcaaagcgcgcaatcaggtgagcgct
cactacaccttgggtacgaactggcgctccagcgcggcgatggtggcggcagttaaccaa
gtgtttagctctgcgactcatccgtttatttacagttatgacattccctttcagcccgtg
gcggcaagccctggtgctgataaacgccattggtcactggaggggcaagtacaacccgcc
ttgacttattggtggccggaagatctcgataaaccacaaagcaaaaccgattactacgcg
caaatggcggaggcgtgtgcggcgcaaattcagcacattttgactgcttcggcctctggc
gcggcaatctttcatcgcggcgaggcgattgaagcgggcgatctggcggtgctggtgcgt
acaggtaatgaagcgcgcatggtgcgtgatgcgctcagtcagcagggcatagccagtgtt
tacctttccaaccgtgacagcgtgtttgccagtgatgtggcacaagatattgaacgcttg
ctgcttgccgtgtggcagccagaagatgagcgcttgctccgtgcggctgtcgcctcgaat
ttgtttgcgttaaccgccagcgagctggatgcgctgaataacgatgaaaacgaatgggaa
cagttgattgccgaatttcgtcaatatcgccgcttgtggagcgagcgcggcgtattgccg
atgctgcgtgcagtattaactcagcgccacattgccgagcgttggctggcggaaagtgaa
ggtgagcgctggctcaccgactatctgcacatcagcgaactcttgcagcaggccacgcgt
gagatcgatagtgatcagggtttactgcgttttctgactcaggcgatggcggatgctgcg
caagggctcggtggcagtgatgagcagatccagcgtctcgaatccgagcggcgtctggtg
cagattgtcaccatccacaaatcaaaagggcttgagtacccgctggtgtttttgccgttt
gtgatgagctatcgcgagagcagcgaaggcaaatattacgacgttgaatcggccaccact
tgggtcgatttaaccggcaatgaagaggcgttagccaaagccgatcaagaacgtttggca
gaagatttacgcttgctgtatgtggcgctcactcgcgcagtgtatggctgttttattggg
attgcgccgctgcgcaacggcaattcgagccaagagccaacctcagcgcatcgcagtgcg
atggggtttctgctgcaagatggtcaagagagtggtatcgcggatctgcagcaagcgctg
cttaaacagtgtgaaaacttgccagatgtcgtgcaatgcccgccaccgaagcgtttcgaa
caagcgtatcagccaccccaattggacgagcgagagctgactgcccgtgagttaagccaa
gcgattgatcgccgctggcgagtgaccagttactcaggcttggtgatgcaatcaagtcat
gctcgccatgatcctttgcaagagttgcccttgcttgaagtaggcggttttgatcttgat
agtgcgcaagagcgtgatggagcggcgctggaatctgtcgagcgctcgattttcaatttc
ccgcgtggtgctcgccccggtacgttcttgcattcgctgtttgaagaggtggatttccag
caatcggcacacagtgaacccaatactaaaatcatccttgaactgatggaaagtgagcag
attgaaagcgagtggctgccggtgttgcaacacttggttgacaccgtattgagcacgcca
ctggatggtaaagcgctgcgcttacaacaaattatggccgcccagcgtctgaccgagttg
gagtttttattgccgatcgaagtgttggatgcgccaaccctgaatcgcatcacccagcgt
cacgatccgctttcggcacacgcgggcgatctcggttttcatgcggtgcaaggcatgctc
aaaggctttatcgatctggtgtttcaatatcaagggcgctattacgtgctggactggaaa
tccaaccatttaggtgacgatccagcggcatatcatccacagcgtttgggcagtgcgatg
gccgatcaccgttacgatctgcaataccaaatttacgcgttagcgctgcatcgctttttg
cgcagccgtttagcccattacaattacgagcagcatttcggcggcgtgttttatctcttc
ttacgtgggatggatgggcgcaccgatcaaggcgtgttccataccaagccaagcttggcc
ttgctagatgagttagatggattgattgcagggcgtgaattggcacaaagagcgagtaaa
gctgggcagatggagcttgatttatga

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