Vibrio cholerae O27 10432-62: VAB027_3227 Help Entry VAB027_3227       CDS       T03829                                  Name (GenBank) HAMP domain protein   KO K19694   two-component system, sensor histidine kinase ChiS Organism vcz  Vibrio cholerae O27 10432-62 Brite KEGG Orthology (KO) [BR:vcz00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01001 Protein kinases [BR:vcz01001]     VAB027_3227   09183 Protein families: signaling and cellular processes    02022 Two-component system [BR:vcz02022]     VAB027_3227 Protein kinases [BR:vcz01001]  Histidine kinases   Other    VAB027_3227 Two-component system [BR:vcz02022]  Other families   Unclassified    VAB027_3227 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Response_reg HATPase_c HisKA HAMP PAS_8 PAS PAS_9 HATPase_c_2 B12-binding PAS_4 HATPase_c_3 Motif Other DBs NCBI-ProteinID:  AKB07458 LinkDB All DBs Position 3516800..3520189 Genome browser AA seq 1129 aa AA seqDB search MFRFYRKQKFKRLQNTLMAAFLALSIIPLTITALFFLHSHSKDLEQQSTSYLVSVRDNKQ QQVIDYMMAKESEVMGFVRSELAYASGGRFYGLVNAFQRLDVSIEAAREHAQQRYITGSG DQIKTSVLPQSSSYVGSERYRLLHKRYHWAYLELLKRSDFDDILLVDIDGNVVYSIYKYD NFGTNLLTGKYQDTNLGHTFKRLEQTVNEQRKTNEDFTPVVISDFVQEDGKQYAWLGAPI IQQGYLHSYAMFRLPSNAITKLIAEGSSNPSMQTILVGQDHRSRTLTSAEIAVEKSKAVV DLALSGKRAVGTYTNTDGEQIIAAYAPINLKNIHWALVVELPEKEAFARVRQLEKLFVFA MLTAIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAMINTERKDEIGRLAVSFER MQRSIREKISLIKSQNKELENNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG IAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSS ATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVI SATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELM HGTLYVSSQPMVGTTFSFTLPLASEEEIAQARLTELPHFQAPEVLDTELPEQSNLPENEH GPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSG YQVCEKLRQTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAARIVAHLT ASKAELRRIENAQLQKELKHRAMVEASLLETQGRLLEQLESAPEAILCVKEGNKVRFANE AAARLFRRTPEQLKRSNAEELIAPKFLNIEQEHYCGNIDVYVDDVRQHLSADVLRLPQGS GLQAMYIFNVGGSVNAARIHNLETAVEALSSYAFEGDKDKLQKLKELGGEFTRLADKASG EYQSKQDLMRAVLVEAMTSALNYWERVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYL RIETLPKTPRWRTVLNSLDYILEHCKEAGPERTHIEMQRDKLQKLLTSE NT seq 3390 nt NT seq  +upstreamnt  +downstreamnt atgtttaggttctatcgaaaacaaaaattcaaacgcctgcaaaataccttgatggctgcg tttttggccctcagcattattcctttgaccattactgcgttgtttttcctacattcacac agtaaagatctggagcagcagagcacttcttacctcgtttctgttcgggataataaacag caacaggtcatcgactacatgatggccaaagagtcggaagtgatgggttttgttcgctcc gagctggcttatgccagtggcgggcgtttttatggtctggtgaatgctttccagcgttta gacgtcagtattgaagcggctcgtgaacatgctcagcagcgctatatcaccggatctggt gaccaaataaaaacctcggtgctcccccaatcaagcagctacgtgggcagtgaacgctat cgactgctgcataaacgctaccactgggcttacttagaactgctgaaacggtcggacttt gatgacattttattggtcgatattgatggcaacgtcgtttattcgatttataaatacgac aattttggcaccaacttattaacgggcaaataccaagacaccaatctaggccataccttc aagcgtttagaacaaacggtcaatgaacagcgcaaaaccaacgaagatttcacccctgtc gtgatttctgatttcgtacaagaggatggtaaacaatacgcttggcttggcgcaccgatt attcagcaaggctacttgcatagttacgcgatgttccgcttaccaagtaacgcgatcacc aaactcatcgcagaaggcagtagcaatccttcaatgcaaaccattctggtggggcaagat caccgctcaagaaccttaacttccgccgaaattgcggttgaaaaaagtaaagctgtggtc gatttagccttatcgggcaaacgcgccgtaggcacttacaccaataccgatggtgaacag atcatcgcggcctacgcaccgatcaatttgaaaaatatccattgggctctggtggttgaa ctgccagagaaagaagcgtttgctcgcgttcgtcagttagaaaaactgtttgtttttgcg atgttgacggccatcgtcttagtggtcatcgcctcgcattacctttccaatttcattacc tcaccgcttttgaagctgacatgggcagccgaacgtgtttcggcaggcgatcttgatgaa gccatgatcaataccgaacgcaaagatgaaattggccgcttggcggtcagttttgagcgt atgcagcgttccattcgcgaaaaaatatcgctgatcaaatcgcaaaataaagagttagag aacaacttactgatcattcgtaagcaaaacgatgagttacagctagcgaataagctaaaa gatgagttcctcgcgaccacatcacatgaattacgcaccccattgcatggcatgattggt attgccgaagccctgatctcgggggcaaatggcccgatttcagcagcgcacaagtatcaa ctcgacatcattatcagcagtgggcagcgcttggcgactctggttgatgatctactcgat taccacaaaatgcgctatggcgcgctggatattcaaaggtgtgccgtcgatttatcgagc gctacgcgcttagtcttggagctttctcaccatttacttggcaagaaaacgctgcgcatt attaatcaagtctcagagcaaccagtctgggtttctgcggatcctcaacgcttagagcaa gtcctgtataacttgatcggcaatgccattaagtacacttccgaaggcaaaattgttatc tccgcaacctatattgacgataaagtccgagtgcaggtggtggatacaggtcaagggatt ccggcagaacaactggagcacatctttgagccattgattcaagcgggccacgatgcgagt cgctatcgccaaggcgcaggactcgggctttccatcagtcgtcagttaatcgaattgatg cacggcactctctacgtaagtagtcagccgatggttggcactacctttagcttcacgctg cctctggcgagcgaagaagagattgctcaagcgcgcttgaccgagctcccccacttccaa gcaccggaagtgttggatactgaactgcccgagcaaagcaacttacccgaaaatgaacat ggcccacttctgttggtcgccgatgatgaaccagtcaacctgcgtgtgctggacagcttt ttacgtcttgaaggttatcgcgtacataccgcgcaagatggccatcaagtacttgaagca attaaacgtgaaaaacctgaattggtgttactcgacatcatgatgccaggcatgagcggt tatcaagtgtgtgaaaaacttcgacaaacttacgaccacgctgaactgcctattattatg ctgacggctctcaaccagtctgatgaccgggtacgagggtttgaagctggagccaatgac tacttatccaaaccattcaacaaacaagagctggccgcgcgcattgtcgctcacctcacg gcgagcaaagccgaactgcgccgaattgagaatgcccagctgcaaaaagagttgaagcat cgcgctatggtagaagcgagcctattggaaacccaaggccgattattggaacagttagaa tctgcaccagaagcgattttgtgcgtcaaagagggtaataaagtacgttttgctaacgaa gcagcagcacgtttatttagacgtacccctgagcagctcaaacgctccaacgccgaagaa ctgattgctcctaaattcttgaatattgagcaagagcattactgcggcaatattgatgtt tacgtcgatgatgtgcgccagcatctctctgccgatgtccttcgcttgccgcaaggttct ggcttacaagcgatgtacatttttaatgtcggaggcagcgtcaatgccgcgcggattcat aacctcgaaaccgcggtagaagctctgtctagctatgctttcgaaggcgataaagacaag ctgcaaaaactcaaggaactgggtggtgagtttactcgtcttgcagataaagcctcgggc gagtatcaatcgaaacaagatttgatgcgtgccgtgttagtcgaagccatgaccagtgcc ttgaactattgggaacgagtatcagggcaaagcaagttcacgtttgccgaacaaagtggc ttgtggcgcgtttatcttgaccgcagcaccctacaaactcgtaccctagacaaatactta cgaattgagacactgcctaaaacaccgcgttggcgaaccgtactgaactcgctcgactac attcttgagcattgcaaagaagcaggccctgaacgcactcacatcgaaatgcaacgcgat aaattgcaaaaactcctgaccagtgaataa

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