Vibrio cholerae O27 10432-62: VAB027_3252
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Entry
VAB027_3252 CDS
T03829
Symbol
pcnB
Name
(GenBank) poly(A) polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAB027_3252 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcz03019
]
VAB027_3252 (pcnB)
Enzymes [BR:
vcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
VAB027_3252 (pcnB)
Messenger RNA biogenesis [BR:
vcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VAB027_3252 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AKB07041
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All DBs
Position
3556104..3557477
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AA seq
457 aa
AA seq
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MNNNDFEPSNTRTYPDLALTIIPRQEHPISRQQISENALKVLYRLHGAGFEAFLVGGGVR
DLLLGGKPKDFDVATNATPEQLRQLFRNCRLIGRRFRLAHIMFGRDIVEVATFRGHHQES
SQSQNIAAQSEAGMLLRDNVYGTIDEDAERRDFTINAMYYNIADYSIHDYAGGMEDLEDR
LVRLIGDPETRYREDPVRMLRAVRFAVKLDFDIEEDTAAPIEQLAPLLRDIPAARLYEES
LKMLQAGHGLETYHLMRQYNLFQQLFPTIAEHFTADHSSKTEQMLDLVLDATDIRVEEDL
RINPAFMFAAMLWYPMIDLADRLMESLNLNEFDAMTEASNRILDEVVKRIAIPRRHTTTI
RDIWQLQQRLPRRSGKRAFRLLELNKFRAGFDFLEMRGEIEGGETKQLAEWWATFQSAGR
NMRQAMVGDIGNATSSSKSGARRRKPSRNKSKSKSSE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaataataacgattttgaaccgagcaacactcgcacatatccagacttagctttgacc
atcattccgcgtcaggaacaccctatctcgcgtcagcagatcagcgaaaatgcgctgaaa
gtgctctatcgtctgcatggtgcggggtttgaggcctttctggtcggcggcggtgtgcgt
gatttacttctgggtggcaagccgaaagactttgatgtggccaccaacgcaacccccgag
cagttacgccaactgtttcgcaactgccgtctgattggtcgccgtttccgtctcgcgcac
attatgtttggacgcgacatcgtcgaagtcgccactttccgtggccatcatcaagagtcg
agtcagagccaaaatatcgctgcacaatccgaagcgggtatgctgctacgtgataacgtg
tacggaacgattgatgaagatgccgagcgccgcgatttcaccatcaatgccatgtattac
aacattgccgactacagcatccacgactatgccggcggcatggaagatctggaagatcgt
ttggtgcgcctgattggcgatccggaaacgcgttatcgtgaagatccggtacgcatgctg
cgcgcggtgcgttttgcggtcaaactcgattttgatattgaagaagataccgcggcgccg
attgagcaacttgcgccattgctgcgtgacattcctgcggctcgtctctacgaagagtcg
ctcaaaatgctgcaagcaggtcatggtttagaaacctaccacttaatgcgtcaatacaat
ctgttccagcagctttttccaaccatcgccgagcattttaccgccgaccacagttcaaaa
accgagcagatgttggatttggtgctggatgcgaccgacattcgagttgaagaagatctg
cgcatcaatccggcctttatgtttgccgccatgctgtggtatccgatgattgatctcgcg
gatcgcttaatggaatcgctcaacctaaatgaatttgatgcaatgaccgaagccagcaac
cgcatcttggatgaagtggtcaaacgcatcgcgatcccgcgtcgccataccaccaccatt
cgtgatatctggcagttgcagcagcgcttaccccgtcgcagtggtaaacgagccttccgt
ctacttgaactgaacaagttccgtgcaggctttgatttcctcgaaatgcgtggcgaaatt
gaaggcggtgaaaccaaacaactggcggaatggtgggccaccttccaaagcgcgggacgt
aatatgcgccaagccatggtgggtgatatcggtaatgcaacgagcagcagcaaatctggt
gctcgccgccgtaaaccatcccgcaacaaatccaagagtaaatccagcgaatga
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