KEGG   Vibrio cholerae O27 10432-62: VAB027_3319
Entry
VAB027_3319       CDS       T03829                                 
Name
(GenBank) tRNA pseudouridine synthase, TruD family protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vcz  Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vcz03016]
    VAB027_3319
Enzymes [BR:vcz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     VAB027_3319
Transfer RNA biogenesis [BR:vcz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    VAB027_3319
 Prokaryotic type
    VAB027_3319
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AKB06033
LinkDB
Position
complement(3615958..3617043)
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGSGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFIVTLSEVSDVPAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVDGD
LALWDQRFQAGEVAISAALAGDNALPTSGQALQLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFATSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcgaaagccaaa
ctcaaagccctaccagagcactttcaagtcaacgaagtgttgggttactccttaactggc
agtggtgaacacttaatggtgcgtattcgtaagacaggggagaataccagctttgtggcc
aatgaattagccaaggcttgtggcgtgccttcacgcgcggtgagttgggcggggttgaaa
gatagacacgccgttaccgagcagtggctgagcgtgcatctgccgaatggcgaaacgccg
gacttctctgcatttctggcacaataccctagcattgaaattctagaggtgactcgtcac
gacaaaaagttgcgtccgggcgatttgcaaggcaatgaatttattgtcactttatcggaa
gtcagcgatgttccagccgtattaagccgtttagaaacggtcgctgaactgggtgtaccc
aattactttggtagccagcgttttgggcgtcatggcaataacctcagtgaagcgcgccgt
tgggggcgtgataatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgcg
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgaacagggctgttttgcc
cgctttattgaaggtgatatcgctttagctgagcagcaaatgtttaatgttgatggtgat
ttagccctttgggatcagcgttttcaagctggagaagttgcgatttcagcggctttggcg
ggcgataatgccttgccgacttctggtcaagccttgcaactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccgggggaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaagatcaaatcactctgcgt
ttctcattggatgcgggtagctttgcgacttccttagtgcgtgaattgatcgaagagatc
ccagtggtacgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

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