Vibrio cholerae O27 10432-62: VAB027_3544
Help
Entry
VAB027_3544 CDS
T03829
Name
(GenBank) sensory box protein
Organism
vcz
Vibrio cholerae O27 10432-62
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
Response_reg
HisKA
PAS_4
PAS_8
PAS
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AKB08595
LinkDB
All DBs
Position
complement(3840276..3843719)
Genome browser
AA seq
1147 aa
AA seq
DB search
MQGWLVIPVSLAYLGVLFLIAWYGDRQTRWLANWRPWIYSLSIAVYCTSWTFYGTVGQAS
VNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVI
AVLGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDN
TEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDGLELSTIAASTYQAPNWPTLLIH
TLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQGLLPNS
SPDTFVISLPVLAGAQDMALLAFLGGTSAASGMVIVSTIALSIMVSNDLVMPLLLRRMRL
SQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFAPAIFG
GMYWREGNRKGVYVGLAIGFILWLITLMSATDMLAGDASNNVLLWVITPPDWLVALGLKS
ADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMSLYQSRVTVGELE
MLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAGVFGASSAKLVLTS
ALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLEL
FEFPLGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRV
IEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQ
RSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDL
ISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSSLWVHSDPK
LLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRG
GQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQSMHPSLTQTVAMV
NEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIPDVILS
DYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLR
ALLNSLS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggttggttggtaattcccgtttcgctcgcgtatctcggcgtgctgtttttgatt
gcgtggtatggtgacaggcaaactcgttggctcgccaattggcggccgtggatctatagc
ttgtcgattgcggtttactgtacctcgtggacgttttacggcacagtcgggcaggcgagt
gtcaatccttggtcgtttctgcctatctatatcgccccgatcttgatgtttgtgtttggt
tggcgagttttagcgcggctgattttgattgctaaacgtgagcacattacttcgctcgcc
gattttattgccgcccgttatggtaaatcgcagggtttggccgtggcggtgacggtgatc
gcggtcttgggtattttgccgtatatcgcgctacaactgcgcggcattacgatgggattg
aacattgtcgctcccgatttaatgacagtgtacggctatcaagaatcgcatgtatcttgg
tttgtggtattggcgctggctctgtttaccatgctgtttggcactcggcatattgataat
accgagcatcaccgcggaatgatgatggcgattgcgtttgaatcgatcgtcaaattggtg
gcctttctctgcgttggggtgtttatcgcgtatctggcgtggcgtaccgatggattagag
ctttcaacgattgcggccagcacctaccaagccccaaactggccgaccttattgattcat
accttgctgaccatgattgcgattgtgtgtctgccgcgccagtttcataccatggtcgtt
gaaaacgagcgcccgcaagatctgcataccgcgcgctggctcttccccgtttatcttctc
ttaatgagcctgtttgtgttgccgattgcttggacgggacaaggtttgctacccaactct
tcgccagatactttcgtgatcagcttgccggtacttgccggtgcgcaagatatggcgcta
ctggctttcttgggcggaacatcggcggcatcggggatggtgattgtgtcgactatcgca
ctatccatcatggtgtcgaacgatctcgtgatgcctttgctgttgcgccggatgcgcctg
tcgcagcgtacccatcgccacttttccggtttgttggtggtgatccgccgcactttaatc
ctacttttgctgttcggtgcgtggggtttttatctggtactcgacagcattccttcgtta
tcggcgatcgggtttctatcgttttcggcgattacccagtttgcccctgcgatttttggc
ggtatgtactggcgagaaggcaatcgtaaaggggtctatgttggcttggcgatcggtttt
atcttgtggcttatcaccttgatgagtgccaccgatatgctggcgggcgatgccagcaat
aacgtcttgctgtgggtgatcactccgccagattggttggtggctcttgggttaaaaagc
gccgattggggcatgctactgagcgtaaccctcaataccttgtgctatatcggtgtgtct
ttggtgacgcgtgccagcttaagtgagcgtttgcaagccgcggcgtttgtcggtactccg
ctgcccgaaaacgaaaacatgagcctttaccaaagtcgcgtgactgtgggtgagcttgaa
atgttggcctcacgttttgtggggcgaactcgggtccgcaacgcctttgctcaatactgg
agtcagcagcgtgaaaccttgctaccgaatcagcaagcctcttccgccttgatccgccat
accgaacgggtattggctggggtatttggtgcttcgtccgctaagttggtgctcacctcg
gcgctgcaaggacgcaaaatgcagcttgaggaagtggcgaccatagtcgatgaggcgtct
gagttgtacgatttcagccgcggcttgttgcaaggggcgattgaacacatcggccaaggc
attgccgtggtggataaacagttgcgtttagtggcatggaaccagcgctatcttgagctg
tttgagtttccgcttggattgattcaagtgggacggccgattgcggatgtgatccgccat
aacgcgcagcaaggcctatgtgggccgggcgatccagaagatcacgtacggcgacgggtc
taccacttagagcaagggaccagtcacacttcctcgcgagtgcgggcggatgggcgagtg
attgaggtgcaggggaacccgatgcccggcggtgggtttgtgatgagctttactgacatt
acggtgtttagagaagcggaacaaagcctgaaaatggccaacgaaacgttggaagagcgt
gtactgcagcgcaccttggagttagaaaagctcaataaacaactggtcaccgcgacccaa
cgttcggagcgcgaatcgcaatccaaatcgcgctttttggcggcggtcagccatgatttg
atgcagccattgaatgccgcacgcctgtttgcctcatccttatctgaagtggctaaagag
gcggaggtgcagaaacttgcccaccatattgaaagtgctttgggcgcggcggaggatttg
atcagcgatttgctggatatttcgcgtttggagtccggcaaaatcgatctgcatccgcac
agttttgcgattatggatgtattgtcgaatctcaatgccgagttcagtgccctcgccgct
aaacaaggtgtgcaatttagcctagtgccatcatcactttgggtgcattcagatcccaaa
ttgctgcgtcgagtaatccaaaatttcctgactaatgcgtttcgttataacccaaacggc
aaagtgattctcggagtgcgccgagtcgccaccgggcaagtgcgtattgatgtgtgggat
aacgggattggtattgagcaagataagcagcaggaaatttttgaggagtttaaccgcggt
gggcaggtgcgctccgaccaaggtctagggcttgggctggcgatttcgaaagggattgcc
catgtactgggtcatcacatttcgatgcgctcttggccggggcagggcagtgttttctct
attacgttagatcgcgctcaatccatgcatccgtcactcactcagacggttgcgatggtc
aatgagaaaggttcagagctgcaacatctgcgtgtgctgtgtgtcgataacgagccagat
attttggttgggatgcgtgatttgctggagcgttgggggtgtgaagtcaaaactgcgacc
gatattcatggcagcctcaaagccttggaagggcaatggatccccgatgtgattttgtct
gattaccgcttggataacggacggacagggcttgaagtgctgcagcagtgccgcttgcgt
ttgggggattgtttcgctggcgtgatcatcagtgccgatcgcaatcccgatatcttagat
gggattgaatcaagcggttttcgctttatggctaaacccattaagcccctcaaactgaga
gccttactgaatagtctgtcttga
DBGET
integrated database retrieval system
