Vibrio cholerae O27 10432-62: VAB027_3629
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Entry
VAB027_3629 CDS
T03829
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAB027_3629 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_3629 (mutM)
Enzymes [BR:
vcz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
VAB027_3629 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VAB027_3629 (mutM)
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAB027_3629 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
COOH-NH2_lig
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AKB05667
LinkDB
All DBs
Position
complement(3937857..3938666)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI
IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAPD
ESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAVVVGVGNIYANESLFTSR
LHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGKA
KQPCPHCGEPLCEQKIAQRNTFFCPQCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattacctgaagttgaagtcagccgtttagggatctccccgcatttggtcggc
ggcaccattcaatccttagtgttacgtacgcccaagttgcgctggcctatccctcaagag
ctgaaacagcttgaagggcagactattctcgcgattcatcgtcgcgctaaatatcttatt
attgaaaccgccgtcggcagtgcgattgtgcatttgggtatgtctggctcgctgcgtatt
ttggatggcgattttcctgctgcgaaacacgatcatgtggatctggtgatgaccagcggc
aaacgactgcgctataacgatccgcgtcgcttcggggcttggttatggtgtgcgcctgat
gagagccatgaagtgctcgggcgtttggggccggagccgttgaccgaagcctttaacgct
gaatatatgatggacaaagctcgcaacaaacgcatcgcagtaaaagctttcatcatggac
aacgcagtggtcgtgggggtggggaatatctatgccaatgaatcgctgtttacatcacga
ctccatccactgcgccccgctcattcgctgagcttagaggagtggcaaaccttagtggcg
aatatcaaacaagtgctgcaagtggcgattaagcaaggcggcaccacgctgaaagatttt
acccaaagcgatggtaagccgggttatttcgcgcaagagctgcaagtgtatggcaaagcc
aaacagccttgcccccattgtggagagccgctttgcgagcagaaaattgctcagcgcaat
acctttttctgcccgcagtgccagcattga
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