KEGG   Vibrio cholerae O27 10432-62: VAB027_3655
Entry
VAB027_3655       CDS       T03829                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
vcz  Vibrio cholerae O27 10432-62
Brite
KEGG Orthology (KO) [BR:vcz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vcz02048]
    VAB027_3655 (hsdR)
Enzymes [BR:vcz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VAB027_3655 (hsdR)
Prokaryotic defense system [BR:vcz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VAB027_3655 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 GalP_UDP_tr_C JHD DUF2498
Other DBs
NCBI-ProteinID: AKB06669
LinkDB
Position
3960889..3963990
AA seq 1033 aa
MVDYTKPIAESNRFIVLDRYRQEWKVAESYQSEGDLERELIQDLVNQGYEYLPTLNNPEA
MLANVREQLQSLNNVKFLEGEWKRFVETYLDKPSDTIVDKTHKIHDDYIHDFVFDDGRIK
NIYLVDKKNIARNKVQVVKQFEQTGSHANRYDVTILVNGLPLVQIELKKRGVAIREAFNQ
VHRYSKESFNSEHSLFKYLQLFVISNGTDSRYFANTTQRNKHSYDFTMNWAKSDNTLIKD
LKDFTATFLQKHTLLNVLLHYSVFDVSDTLLVMRPYQIAATERILWKIKSSFEAKNWCKP
ESGGFIWHTTGSGKTLTSFKAARLATELEFIDKVFFVVDRKDLDYQTMKEYQRFSPDSVN
GSDSTAGLKRNLDKDDNKIIVTTIQKLNNLMKSEGDLSIYNKQVVFIFDECHRSQFGEAQ
KNLKKKFKRFYQFGFTGTPIFPQNALGAETTASVFGRELHSYVITDAIRDEKVLKFKVDY
NDVRPQFKDIETEQDENKLSALENKQALLHPERIREISQYILNNYRQKTHRLQANGKGFN
AMFAVSSVDAAKLYYESLNKLQSGSERPLKIATIFSFAANEEQDAIGDIADESFEVSAMN
SSAKEFLNAAIADYNAYFKTNFSIDSNGFQNYYRDLAKRVKTKEIDLLIVVGMFLTGFDA
PTLNTLFVDKNLRYHGLMQAYSRTNRIYDATKTFGNIVTFRDLEKATVDAITLFGDKNTK
NVVLEKSYTEYMEGFTDIVTGEARRGFMDVVSDLEQRFPDPANIEKESDKKAFAKLFGEF
LRIENILQNYDEFARLKALQTLDMSDPEAVEVFKAEHYLDDKKLAELQTIRLPPERKVQD
YRSTYNDIRDWQRRQKSAEEKEKSTIDWDDVIFEVDLLKSQEINLDYILELIFEHNKKNK
SKTDLVEEVRRVIRASLGNRAKESLVVDFINETDLDQIGDKASIIEAFFSFAQAEQQREA
EELINTEKLNAEEARRYITTSLKREYASDAGTQLNAILPKMSPLNPQYLTKKQSVFQKIA
AFVEKFKGVGGNI
NT seq 3102 nt   +upstreamnt  +downstreamnt
atggttgattacaccaaacccatcgccgaatctaatcggtttatcgtccttgacagatac
cgccaagaatggaaagtcgctgaaagttaccagagtgaaggcgatctcgagcgggaactg
atccaggatttggtcaaccaaggctatgaataccttcctactctgaataacccagaagcc
atgttggcaaatgtgagggaacaactgcaatccctcaacaatgtaaagtttttagagggg
gagtggaagcgcttcgttgaaacttacttggacaaacccagcgataccatcgtagataaa
acccacaagatccacgacgactatatccacgactttgttttcgacgatggccgcatcaaa
aacatctacctggttgataaaaagaatatcgcacgcaataaagtgcaggtggttaagcag
tttgagcaaactggcagtcatgccaaccgctacgatgtgacaatattggtgaatggttta
ccgttggtgcaaattgagctgaaaaagcgtggcgtagccattcgagaagcgtttaaccag
gtacaccgttacagcaaagagagctttaacagcgagcattcgttgttcaaatatttgcag
ttgtttgttatctcaaacggcaccgacagtcgatattttgctaatacaactcaacgtaat
aaacacagttacgacttcactatgaactgggcgaagtcagacaacacgctgatcaaagac
ctaaaagacttcaccgccacctttttgcaaaagcacacactactgaacgtcctattgcat
tattcggtgttcgacgtcagcgataccttgctggtgatgcgtccctatcagattgcagct
actgaacgcattttatggaaaattaaaagttcgttcgaagctaaaaattggtgcaaacca
gaaagcggagggtttatctggcataccacaggctcaggtaaaaccttaaccagctttaag
gccgcccggttggccactgaattggagtttatcgacaaggtgttctttgtagtcgaccgc
aaagacctcgattaccaaacaatgaaagagtaccagcgcttttcgcccgatagtgtgaat
ggctccgatagtacagcaggtttaaaacgaaacctagacaaggatgataacaagatcatc
gtaacaactatccagaaactcaataatctaatgaaaagcgaaggcgacctgtctatttac
aacaagcaggtagtttttatcttcgatgagtgtcaccgcagccagtttggtgaagcccag
aagaacttgaagaaaaagtttaaacgcttctaccagtttggttttactggtacgccaatc
ttcccgcaaaacgcgttaggcgcagaaaccactgccagtgtgtttggccgggaattgcat
tcttatgtcatcaccgatgccatccgcgatgaaaaggtgctcaaattcaaagtggactac
aacgatgtacgcccgcagtttaaggatatagaaaccgaacaggacgagaataaacttagt
gcattggagaacaaacaggcactgctgcacccggagcgaattagagagatatctcagtac
attctgaacaactatcgccagaaaacacatcgtctgcaagcgaacgggaaagggtttaat
gcgatgtttgcagtaagcagcgtggatgccgccaaactgtactacgaatcgctcaataag
ttgcaatctggtagcgaaagaccgctaaaaattgccacgattttttcctttgccgctaat
gaagagcaagatgctattggtgatatagcggatgaaagctttgaagtatcggcgatgaac
agtagcgccaaggagttcttaaatgcggccattgccgactataacgcatacttcaagacc
aatttcagtatcgacagtaacggcttccagaactactaccgtgacttggcaaagcgggta
aaaactaaagaaatcgatttgctgattgtggttggcatgttcctcactggtttcgatgca
ccaacactaaatactttgttcgttgataagaacttgcgttaccacggattaatgcaagcc
tattcgcgtaccaaccgcatttatgatgcgaccaaaacctttggcaacatcgtcaccttc
cgtgatttggaaaaagccactgtcgatgccatcactctgtttggtgataaaaataccaaa
aatgtcgtgttggaaaagagctacacagaatacatggaaggctttaccgatattgttacc
ggtgaagctcggcgcggatttatggatgtggtaagcgatctagagcaacgctttcctgat
ccggccaacattgaaaaagaatcggacaaaaaggcgtttgcaaaactctttggcgaattc
ctgcgcatcgagaatatcctgcaaaactacgatgagtttgccagactgaaggccttacaa
accttggatatgagtgatccggaggccgtagaagtatttaaagctgaacattatttagat
gataaaaagctggctgaactacaaaccattcgcctgccaccagagcgtaaggttcaggat
tatcgttcaacctacaacgacattcgagactggcagcgccgccaaaaatcagccgaagaa
aaagagaaatccaccatcgactgggatgacgtgatatttgaggttgacctgctcaagtcg
caagaaatcaatctcgattacattctggagctgatcttcgagcataacaagaagaacaag
agtaaaacggacctagtagaagaagttcgccgcgtgatccgcgccagcctaggtaaccgt
gccaaagaaagcctagtggtagatttcatcaatgaaaccgacctcgatcagattggcgac
aaagccagtataatcgaagcttttttctccttcgcccaagccgagcaacaacgcgaagca
gaggaactgataaatacagaaaaactgaatgctgaagaagccagacgctatatcactact
tcactaaagcgggagtatgccagcgatgcaggaacccagttgaatgctattctgcccaag
atgagtccattaaatccgcaatatctcaccaagaaacagagtgtctttcaaaagatcgct
gcatttgttgagaagttcaaaggtgtgggtgggaatatatag

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