Vibrio cholerae O27 10432-62: VAB027_3674
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Entry
VAB027_3674 CDS
T03829
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAB027_3674 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcz03019
]
VAB027_3674 (recQ)
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_3674 (recQ)
Enzymes [BR:
vcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VAB027_3674 (recQ)
Messenger RNA biogenesis [BR:
vcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VAB027_3674 (recQ)
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VAB027_3674 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AKB05239
UniProt:
A0A0H4JKJ3
LinkDB
All DBs
Position
complement(3982716..3984551)
Genome browser
AA seq
611 aa
AA seq
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MTATLMAESSALFATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCY
QIPALVLEGVTLVISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLK
LLYVSPERVLTAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPV
MALTATADDATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQ
CGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFG
MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPD
GAQKQVESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEAR
KALSCVYRVNQNFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLI
HKGMLYQNITRNSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGKNYDKKLF
AKLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFL
DLIQEHLTYHG
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgactttaatggctgaatcttctgctctctttgccactcctgaacgtgttttg
cacgaggtgtttggctatcagcaatttcgcgtcggtcagcaagaggtgattgaggcggcg
ctggctgggcgtgatagcttggtcattatgccgactggcggtggtaaatcactctgttac
cagatccctgcgttggtgctggaaggggtcacgttagtgatttctcctctgatttcgctg
atgaaagatcaggttgaccagcttaaagccaacggtgtcgccgccgagtgcgtgaattct
actttggcgcgcgaggagctgatcgcgatttataaccgcatgcatgctggccagctcaag
ctgctgtatgtgtcgccagagcgggtattgaccgccgagtttatcgaacggctcagccat
ctgccgttagccatgattgcggttgatgaagcgcactgtatctcgcaatggggacacgat
tttcgtcctgaatacgcctcactaggccagcttaagcagcgtttcccgaatgtgccggtg
atggcgctgacggcgactgcggatgacgcgacgcgtcacgacattatgcagcgtttgcag
ctcaatgagccgcatcagtatctgggcagttttgatcgcccgaacatccgctacatgctg
gtggaaaaacataaaccggtttcgcaagtgattcgttatctggaaacgcagcgtgggcag
tgcggcatcatctattgtggcagccgtaaaaaagtcgaaatgctcactgaaaagctgtgc
ggcaaccacattcgcgccgccagttaccatgccgggatggacgccgatgaacgcgcttgg
gtgcaagaggcgtttcagcgtgatgacctgcaaattgtggtggcgaccgtggcgtttggt
atggggattaataaacccaacgtgcgctttgtggtgcattttgatattccacgcaacatt
gaatcctactatcaggaaactggccgcgcagggcgtgatggtctgcctgctgaagccatg
atgctgtacgaccctgccgacatgaactggctgcgccgcatgctcgatgaaaagcccgat
ggcgcgcaaaaacaggttgaaagccacaaactcaccgcgatgggcgcgtttgctgaagcg
caaacttgtcgccgccaagtgctgctcaattatttcggcgaatatcgcgataagccgtgt
ggcaactgcgatatctgcctcgatccgcccaagcgttttgatgccacggaagaggcgcgc
aaagccttgtcgtgtgtctatcgcgtcaatcaaaacttcgggattggttatgtggtggaa
gtgctgcgcgggatgcaaaacatccgtattcgcgagcatggccacgacaaaatcaccacc
tacggcatcggccgcgatcacagccatgattactgggtgagtattttccgccaactgatc
cacaaaggcatgctctaccaaaacatcacgcgtaactcgacattgcaactgaccgaagaa
gcgcgccctttgctgcgcggtgaaatgaatattgagctggcggtaccgcgtttagatacc
gcggcgcgcgcggcgaaatccgacaaattgtcgggcaaaaactacgacaaaaagctgttt
gccaaactgcgtaagctgcgtaaatcgatcgccgatgatgaaggcttaccaccgtatgtg
gtgttcagtgacgccaccttgattgacatggcggagatcatgccaacctcttacggcgaa
atgttggcggtgaatggggttgggcagcgcaagctggaaaaatacgccgacccgtttttg
gatctgattcaggagcatttgacctatcatggctga
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