Vibrio cholerae O27 10432-62: VAB027_94
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Entry
VAB027_94 CDS
T03829
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz03030
DNA replication
vcz03410
Base excision repair
vcz03420
Nucleotide excision repair
vcz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAB027_94 (polA)
03410 Base excision repair
VAB027_94 (polA)
03420 Nucleotide excision repair
VAB027_94 (polA)
03440 Homologous recombination
VAB027_94 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcz03032
]
VAB027_94 (polA)
03400 DNA repair and recombination proteins [BR:
vcz03400
]
VAB027_94 (polA)
Enzymes [BR:
vcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAB027_94 (polA)
DNA replication proteins [BR:
vcz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VAB027_94 (polA)
DNA repair and recombination proteins [BR:
vcz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VAB027_94 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VAB027_94 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AKB08194
LinkDB
All DBs
Position
95672..98476
Genome browser
AA seq
934 aa
AA seq
DB search
MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV
IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT
LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDRQGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR
DNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGVVT
ADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFD
TETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLDRDWVIAQLKPLLEDERKA
KVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQ
VAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVP
VLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQKAYELAGQPFNLSSPKQLQTILFEQMK
LPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPNTGRV
HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMA
HLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAK
QLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMR
RKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLS
EIESKVQQLMESAAELAVPLVAEAGHGDNWDQAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatacctgacaatccattgattttgatcgacggctcctcttacctttatcgc
gcatttcatgcttacccgggcaccatgagtaatggtgaaatcccaaccaacgccatctat
ggtgtggtaaacatgattcgcagcatgatgcgccagttcgcttcggatcgcatggcggtg
atttttgatgccaagggaaaaaccttccgtgatgagatgtacgatcaatacaaggcgcat
cgtcctcctatgccagatgagttgcgctgtcaggttgaacctttacaccaagttattcgc
gctatgggtttaccgctgttggcgattgaaggtgtagaagctgacgatgtgattggtacg
ttggcgcgccaagcctcacaagcgggtatgcctgttttgatcagtaccggcgataaagat
atggcgcagttggtggatgataatattaccctgatcaataccatgaccaacgtcgtgctg
gatcgccaaggtgtgattgaaaaattcggtatcccaccagagcttattatcgactacctc
gccttgatgggcgataaagtggataacattcccggcgtacctggggtgggtgaaaaaacc
gcgaccgcacttttgcaagggattggcggcttagaagcgctgtacgccaacctcgataaa
atcgctgctttaggcttccgtggctcaaaaaccatggcacaaaagctggaagagaaccgc
gataatgccaagctctcttatcaactcgccaccatcaaatgtgatgttgagcttgaggag
tctccgcaaaccctgcttaagcagactcccgatcgtgacgccttgatgtcgctctacggt
aagctcgcctttaaatcttggctgaccgaattgcttgatggtggtacaggagtggtgacg
gcggacgagcaaacgaaaacctcttcagttactgtgtcaaccgcagcaactcatgcggct
gcgattcctgaaagcccagcggcccacatcgatcgtagtcagtatcaaaccatcctaaac
gagcaagacttccagctttggttagagaagttaaaacaagccgagctgtttgcctttgat
acggaaaccgacaaccttgattacatggtcgccaatttggtggggatgtcgtttgcggtt
gccgaaggtgaagcggcttatctgccagtcgcgcacgattatctggatgcgccgcagcag
ttggatcgcgactgggtgattgcccagctgaaacctctgcttgaagatgaacgcaaagcc
aaagtgggccaaaacctcaaatacgatgcgagcgtgatggcgcgctacggcgttgagctg
cgtggtattcgccacgacaccatgctgcaatcctacgtctataacagcgtgggcggcaaa
catgatatggatagtttagcgctgcgttttttacagcacagctgtatctcgtttgaacaa
gtggcaggtaagggtaagaaccagctcacctttaaccaaatcgctttagaagaagcggca
caatacgcggcagaagatgcggatgtgacgttgcgtctgcatcagcgaattcatccgttg
attgagcaagacgctaagcttgagcaagtgtatcgcgaaatcgaaatgccactggtacct
gtgctatcacgcattgaacgtacgggcgtgatgatcgacgacatgctgctcagtgcccaa
tcgcaagaaattgcgttacgtttagatcaattagaacaaaaagcttatgagttggcaggt
cagccgttcaacttaagctcgccgaagcagctacaaaccattttgtttgagcaaatgaaa
ctgcctgtcttgcaaaaaacgccatccggtacaccttcaaccaatgaagaagtgttgcaa
gagctggctttggattacccactgccgaaagtgctgattgagtaccgtggtctggccaaa
ctcaaatcgacctataccgataagttgccgaagatgattaatcccaatacagggcgtgta
catacttcttaccatcaagctgtcacggcaacggggcgtctttcatcgacagatcctaac
ttgcagaacattccagtgcgtaatgaagaaggacgccgcattcgccaagcgtttgttgct
ccgcacggttggaaaatcatggcggtcgactactcgcaaatcgagctgcgcatcatggcg
cacctgtcgggcgatcaggcgttattggatgccttccgcgatgggaaagatatccatgcg
gcgacagcggcagaaatcattggtgtgccgattgatcaagtgagcagtgagcagcgtcgc
cgagcgaaagcggtgaactttggtttgatctacggcatgagtgcgtttggtctggcaaaa
cagctcggtattccacgcggtgaagcgcaagagtatatggataaatacttcgagcgttat
cccggtgtgatgcagtacatggaagatacgcgtagccgtgctgcacaattgggttatgtc
gaaaccatcttcggtcgtcgcttacatttgccggaaattacctcacgtaacgctatgcgc
cgcaaagcggctgagcgggcagcgatcaacgcaccgatgcaaggcactgcggcagacatc
atcaaaaaagccatgttgttggtggatgagtggattgagcgggaaggcgatggccgagtc
aaattgctgatgcaagtacacgatgaattggtctttgaagttaaagagtcatctttatcc
gaaattgaaagtaaagtacaacagctgatggagtcagcggccgagcttgcagtgccttta
gtggccgaagctggtcacggcgacaactgggatcaggcacactag
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