Vibrio cholerae O27 10432-62: VAB027_966
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Entry
VAB027_966 CDS
T03829
Name
(GenBank) L,D-transpeptidase catalytic domain protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vcz
Vibrio cholerae O27 10432-62
Pathway
vcz01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcz00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VAB027_966
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcz01002
]
VAB027_966
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcz01011
]
VAB027_966
Peptidases and inhibitors [BR:
vcz01002
]
Cysteine peptidases
Family C82
VAB027_966
Peptidoglycan biosynthesis and degradation proteins [BR:
vcz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VAB027_966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AKB05412
UniProt:
A0A085QGY8
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All DBs
Position
complement(1051061..1051981)
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AA seq
306 aa
AA seq
DB search
MWWKVWVIGCALAVSWSINAAVFDLPIEGSSIVGNTQYHKVEKGETLADIAKKYDIGFLA
LMAANRGVDPFLPQEGFVISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVG
IGRIGRDTPVMQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRL
AYGSGEYLIHGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEP
DRSVFIEVHEPLTRSNGVKKNLVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEIAPPQ
WETIAQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggaaagtttgggtaatcggttgtgcattggcggtcagttggagtatcaatgcc
gccgtgtttgatctacctatcgaaggcagtagcatagtcggtaacacgcaatatcataaa
gttgagaaaggcgagactttagccgacattgcaaaaaaatacgatattggcttcctagca
ttaatggctgccaatcgtggagtcgaccctttcttaccccaagaaggctttgtcatctct
atccctgcaaagatcattttgccgaaagtggcctatgaaggcattgtgattaaccttgct
gagttacgcctttactatttccgtcctaatgaaggtaaagtgcatatcttccccgtcggc
attgggcgtatcggccgcgatacgcctgtgatgcaaacgtcaatcagcagcaagcgcaag
tacccaacttggacgccgccagcatcgattcgcaaagagtacaaagccaaagggattgat
ttgccgccagtcgtgcccgcaggcccagaaaacccgctcggtgattacgcgatgcgttta
gcttatggttctggagaatatctgattcatggaaccaacaaagattttggcgtaggcatg
agggtgagtgctggttgcattcgtatggatccgaaggacattgagtggctttaccaacaa
gttgaacgtggagaaaaagttcggattatcaacgaaccgatcaaagttgcgcttgaacct
gatcgtagtgtgtttattgaagtgcatgagccgcttacccgcagcaatggcgtgaagaaa
aacttggtggtaccagaagagctgagttggtggctgcaagagcataaaatctctgatgca
aaagcgcgcgccgcagttttagcacagaatggggttccggtcgaaattgctccaccacag
tgggaaactatcgcccagtaa
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