Verticillium dahliae: VDAG_00012 Help Entry VDAG_00012        CDS       T03450                                  Name (RefSeq) pre-mRNA-splicing factor prp1   KO K12855   pre-mRNA-processing factor 6 Organism vda  Verticillium dahliae Pathway vda03040   Spliceosome Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VDAG_00012  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:vda03041]     VDAG_00012 Spliceosome [BR:vda03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     VDAG_00012  Complex C    U5 SnRNP specific factors     VDAG_00012 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_14 PRP1_N HAT_PRP39_N TPR_19 HAT_Syf1_CNRKL1_N HAT_PRP39_C TPR_16 HAT_Syf1_CNRKL1_C Suf TPR_2 TPR_8 TPR_15 TPR_1 TPR_CcmH_CycH TPR_9 TPR_21 Motif Other DBs NCBI-GeneID:  20701475 NCBI-ProteinID:  XP_009649684 UniProt:  G2WR29 LinkDB All DBs Position 2 AA seq 718 aa AA seqDB search MASRRDFLSQPAPENYIAGIGRGATGFTTRSDLGPAREGPSEDQIKEAVAKRAAQLGIGG DGKKGDDKDDDKGGDDDRFKDPDNEVGLFAGGLYDKDDEEADRIWQEVDDRWAGGGRSSG GARAVQEEYERNNPKSPAVATGPRRGPGPITDDEDEPNSPGGWIAGARLEELAGKTVAAR NVIARGCEKCPKNVDVWLENIRLNDVRNAKIIAAEAIKKNDKSVLLWVEAMRLENEPRAK KRVIRLALDHIPDSEALWKEAVNLEEDQTDARLLLAKATEIIPLSVDLWLALARLETPEN AQKVLNKARRAVPTSFEIWIAAARLQEQLGASVNVMKRAVNVLVKESAMPKREEWIAEAE KCEEEGAVATCGDIIKETLGWGLDEDDDRKDTWMDDARGSINRGMYETARAIYSYALRVF VNSRTLWMAAADLERNHGTRASLCQVLDKAVDACPKSESVVFERVLGHTDAALDLVQQAL QYFPAAAKLWMLKGQIYEDLDKLGQAREAYSTGVKAVPASVPLWLLYARLEERAGLVVKA RSVLDRARLAVPRSPALWCESVRVERRAGNVNQAKSLMAKALQEVPKSGLLWSEQIWHLE PRTQRKPRSLEAIKKVDNDPILFVAVARLFWGERKLEKAQNWFEKALVLDSNNGDTWAWY YKFLLQHGTDEKRGEVITKCVLVEPRHGEYWQAIAKRPANARKGTEEILNLVANSLER NT seq 2157 nt NT seq  +upstreamnt  +downstreamnt atggccagtcggcgcgacttcctcagccaaccggcgcccgagaactacattgctggcatc ggccgtggcgcgacaggcttcacgacacgatccgatctgggcccggcacgcgagggaccc agcgaggaccagatcaaggaggccgtggccaagcgtgcggcgcagctcggcatcggcggc gacggcaaaaagggcgacgacaaggacgacgacaagggcggcgacgacgaccggttcaag gaccccgacaacgaggtcggcctcttcgccggcgggctctacgacaaggacgacgaggag gccgacaggatatggcaggaggtcgacgacagatgggcaggcggcggcagaagcagcggg ggcgcgcgagctgtccaagaagagtacgagcgcaacaacccgaaatctccagcagttgcg accggacctcggcgcggccctgggcctatcacggacgacgaggacgaacccaacagcccc ggaggctggatcgccggcgcgcgcctcgaggagctcgccggcaagacggtggccgcccgc aacgtcatcgcccgcggctgcgaaaagtgccccaagaacgtcgacgtctggctggagaac atcaggctcaacgatgtccgcaacgccaagatcatcgccgccgaggccatcaagaagaac gacaagtcggtgctcttgtgggtcgaggccatgcggttggagaacgaaccgcgggccaag aagagggtcatccggctggcgctggaccacattcccgactcggaggcgctgtggaaggag gctgtcaatctcgaggaggaccagacggacgctcgcctgttgctggccaaggcgaccgag attatccctctgtcggtcgacctctggctggcgctggcgcggctggagacgcccgaaaat gcgcaaaaggtgctgaacaaggcgagaagggcggtgccgacgtcgttcgagatctggatc gccgctgccaggttgcaggagcagctgggggccagcgtcaacgtcatgaagcgcgctgtc aacgtcttggtcaaggagtcagccatgccgaaacgcgaggaatggatcgccgaggccgaa aagtgcgaggaggagggcgccgtcgccacgtgcggcgacatcatcaaggagactctcggc tgggggctcgacgaggacgacgatcgaaaagacacgtggatggacgatgccagggggagc atcaaccgcggcatgtacgaaacggcacgggccatctactcgtacgcgctccgcgtcttc gtcaacagcaggacgctgtggatggcggcggccgacctcgagaggaaccacggcaccagg gcgtcgctgtgccaggtgctcgacaaggccgtcgacgcgtgccccaagagcgagagcgtc gtgttcgagcgcgtgctcggccacacggacgccgcgctggacctcgtccagcaggcgctg cagtacttccccgcggcggccaagctctggatgctcaagggccagatctacgaggacctc gacaagctcggccaggcgcgcgaggcgtacagcacgggcgtcaaggccgtgccggcgtcg gtgccgctctggctcctgtacgcgcggctcgaggagcgcgccggcctcgtggtcaaggcg cgctccgtgctggaccgcgcgcgcctcgccgtgccccggtcgccggcgctctggtgcgag tcggtgcgcgtcgagcgccgcgccggcaacgtcaaccaggccaagtcgctcatggccaag gcgctgcaggaggtgcccaagagcggcctgctgtggagcgagcagatctggcacctcgag ccgcgcacgcagcgcaagccgcgcagcctcgaggccatcaaaaaggtcgacaacgacccc atcctcttcgtcgccgtggcgcgcctgttctggggcgagcgcaagctggagaaggcgcag aactggttcgagaaggcgctggtgctggacagcaacaacggcgacacgtgggcttggtac tacaagttcctcctccagcatggcacagacgagaaacggggcgaggtcatcaccaagtgt gtgctcgtcgagccgagacacggcgaatactggcaggcgattgcgaagcgcccagccaac gcgagaaagggaaccgaggagatcctcaacctggtggccaacagtctagaaaggtaa

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