Verticillium dahliae: VDAG_00097
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Entry
VDAG_00097 CDS
T03450
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vda
Verticillium dahliae
Pathway
vda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDAG_00097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_00097
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VDAG_00097
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
VDAG_00097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
HUN
WKF
ABC_tran_CTD
DUF7310
Motif
Other DBs
NCBI-GeneID:
20701560
NCBI-ProteinID:
XP_009649769
UniProt:
G2WRB4
LinkDB
All DBs
Position
2
AA seq
650 aa
AA seq
DB search
MAARKLQQEVEKCFKKVAEGVAEFEAIYEKIEQSNNLSQKEKLEDNLKREIKKLQRMRDQ
IKTWAASNDIKDKGPLLEHRKLIETQMERFKAVEKAMKTKAYSKEGLASSQKLDPAEQAR
AEAGEFLGNQVDELELQIETLEAESESIQATMKKGKSQGAKADRIAEIDRIIERHKWHQG
KLELIRRSLENGGIDTEQVTDLEETIRYYVTDSLTDDFIEDEEMYDELNLDEEEGVFGVP
QEDKGSSQDNASLAEEATPEPEVVKPVTVAKAKQVAEVAAASARRPSAQVKSPLPALATL
HTPLATISNGTSSGPVMKPASVPARPAEGLKYASAAAAAAANDKIGIAPLPPPPGMSPSP
VVLSTVQAKTGAASATSSPATTAAQPAAVEKTEPKAPAPASSSSATEALTATTRATPAPA
KAEKSKAASKAATAVEPVEPVRSKRQQRKLAEQAEAEARTTARANGTAHSKTTQEEHEEE
SIYHLPASLQDLVESFEVTRKKPASLSSPATLRMLQTSQATCPDPLDSEVPRTYRPDVRV
PATGTGFPQEPLALLDDPRLYQRIEPDTLFYVFYYKQGTPQQYLAAKALKDQSWRFHKQY
QTWFQRHEEPKSITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDDV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgaaaactgcagcaagaagtggagaagtgcttcaagaaggtggcagaaggc
gtggccgaattcgaggccatctacgagaagattgaacagtccaataacctctcccaaaaa
gagaagttggaagacaacctgaagcgcgagatcaagaagctgcagcggatgcgagatcag
atcaagacatgggccgcaagcaacgacatcaaggacaagggtcctttactcgagcatcgc
aagctgattgagacgcaaatggaacgcttcaaagctgttgaaaaggccatgaagacgaaa
gcctactccaaagaagggttggcttcgtctcagaagctcgatccagcagaacaagccaga
gccgaagctggcgagtttcttgggaaccaggtggacgagttggaactgcaaatcgagacg
ctcgaggccgagtccgaatccatacaagccacgatgaagaaggggaagagtcagggtgcc
aaggcagatcgtatcgccgagattgaccgcatcatagagcgacataagtggcatcaaggc
aagctcgagctgatccggcgctcactcgagaacgggggcatcgataccgaacaggtgacc
gacttggaggaaacgatccgctactacgtcaccgacagcttgactgacgactttatcgaa
gatgaagaaatgtacgacgaactcaacctggacgaggaagaaggcgtgttcggcgtgccg
caggaggacaagggttcgtcacaagacaacgcatcactggcagaagaggcgacgccagaa
cccgaggttgtcaagcctgtgactgtagccaaggcgaaacaggtagcagaagttgcagcg
gcatcagcgcgacgaccaagtgcgcaggtgaaatcaccactgcctgctttagccacttta
catacacctctggcaacgattagtaatggtacgtcttcagggccagtcatgaagccagct
tccgtcccggcaaggccagccgagggactcaagtacgcatctgcggctgctgcggctgct
gcgaacgataagatcggcatcgcaccattgccgcctccaccaggcatgtcgccgtcacct
gttgtgctgtcgacggtgcaagccaagacgggcgcagcgagcgcgacgagctcaccagcg
acaacggcagcgcagccagctgctgtggagaagacggaacccaaggcgccggcacccgcc
tcttcgagcagtgcgaccgaggcccttacagccaccacacgggcgacgcctgctcccgca
aaggcggagaagagcaaggctgcgagcaaagcagcaacggcagtggaacccgtggagcct
gttcgaagcaagcgacagcagcgcaagcttgccgaacaagcggaggccgaagctcggacg
acggcgcgtgccaacggaacggcgcacagcaagacgacccaggaggaacacgaagaggag
tccatttatcacctgcctgcctcgctccaggatctcgtcgagtccttcgaagtgacgcgc
aagaagcctgcgagcctgtcgtcgccggcgacgttgcgcatgctgcagaccagccaggct
acatgccctgacccgctggactcggaggtccctagaacatatcgaccggacgtgcgggtc
cctgccaccggaacagggtttcctcaggagcccctcgccctgctggacgacccccggcta
taccaacgcatcgagccagacacgcttttctatgtgttttactacaagcagggaacaccg
cagcagtacctcgcagccaaagcgctgaaggaccagagctggaggttccacaagcaatac
cagacttggtttcaacgacacgaggagccgaagagtatcacagaagagtttgagcagggc
acttaccgtttctttgactacgaatccacatggatgaaccgacggaaggccgacttcaag
tttgcctacaagttcctcgaggacgatgtatga
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