Verticillium dahliae: VDAG_00146
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Entry
VDAG_00146 CDS
T03450
Name
(RefSeq) ATP-dependent RNA helicase DBP5
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
vda
Verticillium dahliae
Pathway
vda03013
Nucleocytoplasmic transport
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDAG_00146
03015 mRNA surveillance pathway
VDAG_00146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_00146
Enzymes [BR:
vda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VDAG_00146
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VDAG_00146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
20701609
NCBI-ProteinID:
XP_009649818
UniProt:
G2WRG3
LinkDB
All DBs
Position
2
AA seq
485 aa
AA seq
DB search
MADANPPTNPPAEGDPANLEDAQLDGADSGLVENSYDVDIKLGDLQQNPDSTLYSAKTFK
EMNLSEPILKGLLSLNYFKPSKIQEKALPLMLQNPPRHMIAQSQSGTGKTAAFVVTILSR
IDLSQPNQPQALVLAPSRELARQIEGVINKIGNFCEGLKVAAALPGALERGAPVQANVIV
GTPGTVMDITRRRQLDVSQLRLLVIDEADSMLDQQGLGDQCVRVKSTLPRNIQILLFSAT
FPDKVMGFAEKFAQGADQIRLKHTELTVSGISQMYIDCDSEDAKYENLVKLYGLMTIGSS
VIFVRTRESANEIQKRMEADGHRVAALHGAFDGNDRDRLLEEFRSGRSKVLLTTNVLARG
IDVSSVSMVINYDIPMKGRGDTEPDPETYLHRIGRTGRFGRIGVSISFVSDKKSFQALSA
IAELYQIDLVQLDTSDWDSAEEAVQKVIKSNRAKAAFAPSATDAARAAAASEAAPGAEPT
ATTSA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccaacccccccacgaaccctcctgctgagggcgaccctgccaaccttgag
gatgcccagctcgacggcgcagactcgggcctcgtcgagaacagctacgatgtcgacatc
aaattgggtgatcttcaacagaatcccgacagcactctttactcagcaaagaccttcaag
gaaatgaacctctccgagcctatcctcaaaggtctcctcagcctgaactacttcaagcct
tcgaagatccaggagaaggcccttcctctcatgctccaaaaccctcctcgtcacatgatc
gcgcaatctcagtcgggaaccggcaagactgctgcctttgtcgtcaccattttgtctcgc
atcgacttgagtcaacccaaccagcctcaggcccttgttctcgcgcccagccgtgagctt
gctcgccagatcgaaggtgtgataaacaagattggaaacttttgtgagggtctcaaggtt
gcggctgctctcccaggcgctctggagcgtggcgctcctgtccaggccaatgttatcgtg
ggcacgcccggtaccgtcatggacattactcgccgccggcaactcgacgtctcccagctt
cgtctcctcgtcattgacgaggccgacagcatgctggaccagcaaggccttggtgatcag
tgtgtccgggtcaagagtactctaccccgtaacattcagatcctcctgttctctgcgacg
ttccccgacaaggttatgggctttgccgaaaagtttgcccagggcgctgaccagatccga
ctcaagcacacggagcttacagtgtctggcatctcgcaaatgtacatcgactgtgacagt
gaagatgcaaaatacgagaatcttgtcaaactctacggcctcatgactatcggctcctcg
gtcatcttcgtcaggactcgcgagagcgccaatgagatccagaagcgcatggaggcagat
ggtcaccgagtggcagcactgcacggcgctttcgatggtaacgatcgcgaccgacttttg
gaagagttccgaagcggccgttccaaggttttgctcacaaccaatgtgctggcccgaggt
atcgacgtttctagtgtctcgatggtgatcaactacgacatccccatgaagggacgaggc
gataccgagcctgacccggagacctatcttcaccgaattggccgaactggccgattcggt
cgcatcggcgtcagtatcagctttgtctcggacaagaagagcttccaggctctgtcggcg
attgctgagctgtatcaaatcgatctcgtccagctcgacacgtctgattgggactctgcc
gaagaagctgtgcaaaaggtcatcaagtccaaccgtgccaaggctgcgtttgctccgagt
gccacagatgctgccagagctgctgctgccagcgaagcggctccaggcgccgagcccact
gcgacgacgtccgcatag
DBGET
integrated database retrieval system
