Verticillium dahliae: VDAG_00359
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Entry
VDAG_00359 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K15217
RNA polymerase I-specific transcription initiation factor RRN5
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_00359
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
VDAG_00359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
20701822
NCBI-ProteinID:
XP_009650031
UniProt:
G2WS26
LinkDB
All DBs
Position
2
AA seq
569 aa
AA seq
DB search
MDSDFASYSSLSGNGAASSGEASHQPSGPESLSSPKPHVNPHGDGFGTVRDGSSPLKRSA
EPSDEQQPSKRYKPGFNHAYMDLLNIDIEDATNRVVLEKRPLLKPNQVGMVTWTSLEKDL
FYEALARVGKDDLSGLASRVRTKSELEIRQYLKLLADQHEQMQSDPHYRWEDHLEKADYP
AAKELGEACCDALEEVADDMLLRIERHEQKTEEKKWGDYWLINTPIAKLIDEDSALEHPL
DFAELFNLQSWLRLPKRVYMNSSCEGENWQDLSDEAPAIRATALKDFHALAVAVTRKLVL
SSLYTSQSRIKAKQVIQPNIRKAVKVKDVEGALASAGMKRDSRQYWATCARRLGLQVHDT
PFEDGAGLGVDNDEPPMSYAEVEQQLLPCPEPPAQLTPRVVRPWKKTNAHTIDFDFSDTS
SANEEDTDQVTSSSPSSDDEDEATLEDEDEELAVHDEVNEALLYTVNELPKTHRTQEAVE
MRVRLDREQERHAEAIDAQGNYEEEKAMWTLVGKSPPEPLVKPDQAKTPPKSTMRLEEVH
DSGAHWRNKLEYASEWEKHGFSKLSDFKF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggattccgactttgcctcttactccagcctcagtggaaatggtgcagcatcgtcaggt
gaagcttctcaccagccttcaggaccagagtccctatcgtcgccgaagccacacgtaaat
ccccatggcgatggttttgggacggtccgcgatggcagcagccctctcaaaaggtccgca
gagccttccgacgagcagcagccttccaagcgctacaaacctggcttcaaccacgcctac
atggatctgctgaacatcgacattgaggatgccacgaatcgggttgtgcttgagaaacgg
ccactgctcaaaccgaatcaagtgggcatggttacctggacaagcttggagaaggatctc
ttctatgaagcgttggcgagagtgggaaaggacgacctatcgggccttgcatcgcgagtc
cgcaccaagagcgaactcgagatccgacaatacctcaagctcttagcggaccagcatgag
cagatgcagtcagatccccattatcggtgggaggatcatctcgagaaggcggactatccg
gcggccaaggaactgggtgaggcctgttgcgatgcactcgaggaagtcgctgatgacatg
ttgctccggatcgagcgacacgagcaaaagacggaggagaagaaatggggggactactgg
ctcattaataccccaatcgcaaaactcatcgacgaggacagtgccttggagcatcccctg
gacttcgctgagctcttcaatctccagtcttggctgcggctccccaagcgcgtgtacatg
aactcttcgtgcgagggcgagaactggcaggacttgagtgacgaggcgccagccatacgc
gctactgcactgaaggactttcatgcgctcgccgtcgccgtcactcgcaagctcgtcttg
tctagtctatacacgtcacagtcacggatcaaggcgaagcaggtcattcagccaaacata
cgaaaagccgtcaaggtcaaggacgtggagggcgcgctggcctctgcgggcatgaagcga
gactcgaggcaatactgggcaacctgcgcgcggcgcctaggactccaggtccacgacacg
cctttcgaggacggcgcgggacttggcgtcgacaatgatgagccgcctatgtcatatgcc
gaagtagagcaacaactgctcccttgtcctgagccacctgctcagcttacgccgcgggtg
gtccggccgtggaagaagaccaatgcgcacactatcgatttcgacttctcagacacgtcg
tctgccaatgaagaggacacagatcaagtcacctcgtcatcgccgtcgtctgacgatgaa
gacgaggctaccttggaggacgaagatgaagagctcgccgtccatgacgaagtcaacgag
gccttgctgtacactgtcaatgagcttcccaagacgcatcgcacgcaggaggctgttgaa
atgcgtgtgcgtctggaccgcgaacaggaaagacatgctgaggctatcgatgcgcagggt
aactacgaagaagagaaagccatgtggacgctggtgggcaaatcacccccagagcccctg
gtgaagccagatcaggcgaagacgccgcccaagtcgacgatgagacttgaagaagtccat
gattcaggagctcactggaggaacaagttggaatatgcgtctgagtgggaaaaacacgga
ttctcaaagctctcggattttaaattttaa
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