KEGG   Verticillium dahliae: VDAG_00398
Entry
VDAG_00398        CDS       T03450                                 
Name
(RefSeq) karyopherin
  KO
K15436  transportin-3
Organism
vda  Verticillium dahliae
Pathway
vda03013  Nucleocytoplasmic transport
vda03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDAG_00398
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    VDAG_00398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vda03016]
    VDAG_00398
Transfer RNA biogenesis [BR:vda03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    VDAG_00398
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd Importin_rep_3 IBN_N Adaptin_N GAT RVT_N HEAT_SCC3-SA
Other DBs
NCBI-GeneID: 20701861
NCBI-ProteinID: XP_009650070
UniProt: G2WS65
LinkDB
Position
2
AA seq 966 aa
MAANGAQGSYTPENVLAAVVTMRGGEREAKKQAHEYLERFQKSKDAWPLVIGILQSDADA
EAKLFAATTMRGKLTYDLSTDISDSELPALREQILLLLKHYASGLRPIRVQLCVCLAVLA
IHMKDWKDVLPVVVSALEGPQSHTAVLDFLRVLPEEVTEGRKITLSEEELSERTKELLGD
NAERVVHLLVNYAQASAKPADDPLLMECITSWLREVPVNTIVRSPLCDVIFNGISGDSPR
EAAETVCTILRETRDVDDNQDTIQLLLSRILQLQPRIEKAVAEEETETYEALTKILATAA
ESWVVAIVREPGHFRPIVDAVLECAARDRDREVIEHTFDFWYELKQYLVLDIYIEARLQL
VDVYGKLVDVLFNHLRYPEGNENDLFEGDREAEERFREFRHRMGDTLKDACAVMGVTDCL
TKVLNGIKTWSAERSTTTSAPGVVPHWQELEAPLFAMRAMGQMVPKDENIVLPQLMPLLV
EVPNHEKLRFATIMILGRYTEWTAEHREYLEPQFTYIVSSFHTDSKEVVRAAAMAIKYFC
TDCRELLSDQVLQLQTFYDQILDKLPDMSQEEITEGVASVVAVQPEAEMYKLLKLYCDPL
VARLMNKANNATTEEGKVALADHVQLITIFVQIVKPYSAPGAENQAVKYWQEVFPVLAKI
VENFLDFVPICERICRCWRNMIISYRTAMTPLLPELANKLASGFAASRQGAFLWVTAAIM
REFSEEREHVDQAITQSIYSFFEAQATTFLRVLNELRPSELPDVIEDFFRLLIDALLYFP
HRLIPSELLLPIYEAAIYALTLEQRDPLSATLHFLRDLLTYGGDNPATSDKLPADVAAKI
QEMVKSLLGSHGEKLVKQVLAGMMITFPRDCFADGSGVLLSMFELLPAETTVWVERTLQL
LPQGTVTPAEANKLMIKIKERIGGDQNNMRQVRALLQDFTNTYRRRYVAPRDGLGQLEAD
RFRFNR
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggctgcaaacggtgcgcagggatcgtacactcccgagaatgtgcttgcggcggtagtc
accatgcgcggtggggagcgagaggccaagaagcaggcgcacgaatacctggagcgcttt
cagaaatcgaaagatgcttggccgctcgtcattggcatcctgcagtctgatgccgatgct
gaggcgaagctgtttgcagccaccacgatgcgcggaaagctcacatatgacctttcgacc
gatatttcggattcggagcttcctgcgcttagggagcagatcctcctactcctgaagcac
tatgcatccggtctcaggccgatcagagtccagctctgcgtttgcttggcagtcctcgct
atacatatgaaagactggaaggatgtcctccccgtcgtcgtgtcggcactggaaggaccc
cagagtcataccgccgttctcgacttccttcgcgtgcttcccgaagaagtcaccgaaggc
cgcaagatcaccctatcagaagaagagttgtctgagaggacgaaagagctactgggcgat
aatgcggaacgagtggtccacctacttgtcaactatgcacaagcatcagccaaaccagcc
gacgaccctctgctgatggagtgcatcacgtcgtggctgcgcgaggtgcccgtgaatacc
atcgttcgctcaccgctgtgcgacgttatttttaatggcatttccggcgactcacccagg
gaggctgcggagaccgtttgcacgatcctccgagagacaagagatgtcgacgataaccaa
gacaccatccagctccttctttcccggatccttcaattgcaacctaggattgagaaggct
gtagccgaggaggagacggagacatatgaagccttgacgaagattctcgcgactgctgcc
gaatcatgggtcgtagccattgtgcgcgagccaggccacttcaggcctatcgtcgacgct
gttctcgaatgtgctgcccgcgaccgagaccgtgaggtcatcgagcacacattcgacttc
tggtacgagctcaagcagtaccttgttttggatatctacattgaggcgaggcttcagctc
gtggatgtctacggcaaacttgtggacgtcctcttcaaccacctccgatacccagaaggg
aacgaaaacgacctgttcgagggtgatcgtgaggccgaggaaagattccgcgaattcagg
caccgcatgggtgatacgcttaaggatgcctgcgccgtcatgggagtgacggactgtctg
accaaggtccttaatggcatcaagacgtggtcagcggagagaagcaccaccacttcggcc
cctggtgtagtaccgcactggcaggagctcgaggcacccctattcgccatgcgcgccatg
ggccaaatggttccaaaggacgagaatattgtcctgcctcaactgatgcctctcctggtg
gaggtgcccaaccacgaaaagctccggttcgcaaccatcatgattctaggccgctatacc
gaatggacagccgagcaccgcgaataccttgagccgcaattcacctatattgtctcttcc
ttccacaccgattctaaggaggttgtcagggcggcggccatggcgatcaagtatttctgc
actgattgcagagaacttcttagcgaccaagttctccaactccagaccttctacgatcag
attcttgacaagcttcccgacatgagccaggaagagatcacagagggtgttgcgagcgtg
gttgccgtccagcctgaggctgagatgtacaagctgcttaagctgtactgtgatccgctc
gtcgccagactgatgaacaaggccaacaatgctaccactgaggaaggcaaggtggctttg
gcagaccacgtgcagctgatcaccatcttcgtccaaatcgtcaagccgtactctgctcct
ggagccgagaaccaggcagtcaaatactggcaagaggtcttccctgtgctcgcaaagatt
gtcgagaacttcctcgactttgtgcccatttgtgagcggatctgccgatgctggcgcaac
atgatcatctcgtacaggacggccatgacaccactgctgccggagctggcaaacaagctg
gccagcggatttgccgcctccaggcaaggcgcattcctttgggttaccgcggccatcatg
cgcgagttctccgaggagcgcgagcatgtcgaccaggccatcactcagagcatttactcc
ttcttcgaggcccaagccacgactttcttgcgcgtgctcaacgagttgcggcctagtgag
ctccccgacgtcattgaggatttcttccgtctcctcattgatgcactgctctacttcccc
cacaggctcatcccttcggagctgctgcttccgatttacgaggccgccatctatgccctt
acactcgagcaacgcgatccgctgtcggctactctccacttcctgcgggatcttttgaca
tacggcggtgacaacccggccacctcggacaagctgccagcggacgttgcagcgaagatt
caggaaatggtcaagagcctcctcggcagccacggcgaaaagctcgtcaagcaggtgctg
gctggcatgatgatcacattccctcgcgactgcttcgccgacggtagcggtgtgttgctc
tccatgttcgagctcctccccgcagagacgactgtctgggtcgagcgaacgctgcaactg
ttgccccagggcaccgtgacgcctgccgaggcgaacaagcttatgatcaagatcaaggag
cgcatcggcggtgaccagaacaacatgcgccaggtcagggcccttctgcaagactttacc
aacacataccgccggcgatatgtcgcacctcgcgacgggctcggtcaactcgaggcagat
cgtttccgcttcaaccgctag

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