KEGG   Verticillium dahliae: VDAG_00498
Entry
VDAG_00498        CDS       T03450                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
vda  Verticillium dahliae
Pathway
vda03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VDAG_00498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vda03400]
    VDAG_00498
DNA repair and recombination proteins [BR:vda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     VDAG_00498
SSDB
Motif
Pfam: Tyr-DNA_phospho Trnsprt_adja_ssu
Other DBs
NCBI-GeneID: 20701961
NCBI-ProteinID: XP_009650170
UniProt: G2WQ56
LinkDB
Position
2
AA seq 527 aa
MERPSKRLRVTEDVTDDPPAQPSSLHRAISPPARKKSKATTTPSPFQLTHIRDLPDSSNA
DTVTLKDLLGDPLISECWEFNFLHDIPFLMSHFDKDTRDLVKVHVVHGFWKREDGNRMAL
QEEAAAWKNLELHNAPMPEMFGTHHTKMMILFRFDDTAQVIIHTANMIAKDWTNMTNGVW
RSPLLPLGPQPDSGKPEAEEESEADEDFGSGRKFKSDLLSYLRAYDARKITLRPLTEQLV
KYDFAGIRAVFIASVPGRHAIHDTSQTAWGWPALKRALRRVPVQAGKSEVVVQISSIATL
GGTDSWLQKCLFDSLSLSKGSSISPRPAFRVVFPTADEIRRSLDGYASGGSIHTKIASPQ
QAKQLAYLKPIFCHWANDAPGGKEISKDTALQDAGRQRAAPHIKTYIRYGTQSIDWALLT
SANLSKQAWGEAASAAQEVRIASWEAGVLVWPSLVAGTDEAIMVGTFKTDAPGEEAPSGA
PSSTGNVVGLRMPYSLPLQLYGKDEIPWVASNEHTEPDWAGRVCLRQ
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggaacgtccctccaagcgactgcgtgtcactgaggacgtgacggatgacccgccagcc
cagccttcaagccttcatcgtgccatcagccccccagccaggaagaaatccaaggcgacc
acgaccccgtctccttttcagctgacgcatattcgagatctacccgattcgtcgaatgca
gataccgtcaccttgaaagacctgctcggcgacccgctcatctcagagtgctgggagttc
aactttcttcacgacattcccttcctcatgagccactttgacaaagacacaagggacctc
gtcaaagtgcacgtcgtccatggcttctggaaacgggaggatgggaaccgcatggctctg
caagaagaggctgcagcctggaagaaccttgagctccacaacgctcccatgcccgagatg
ttcggcacgcaccacaccaagatgatgattctctttcgcttcgacgataccgcccaggtc
atcattcacacggccaacatgatcgccaaggactggaccaacatgaccaatggcgtctgg
cggtcgccgcttctgccgctggggccccagcccgatagcggaaagccggaagctgaagag
gaatctgaagcagacgaggactttggctcggggcgcaaatttaagtccgatttgctgagt
tacctgcgcgcctacgatgcccgaaagatcaccttgagaccgcttacggagcaactggtc
aagtacgatttcgcgggcatacgcgccgttttcatcgccagcgttccgggaaggcatgcc
atacacgacacatcgcagacggcatggggttggccggcgctcaagcgtgcccttcgccgc
gtgccggttcaagcgggaaagtcagaggtagtcgtgcagatctcgtccatagccacgctc
ggtggaacggattcttggctgcaaaagtgtttgttcgactcgctttcgctgtcaaaaggg
tcgtccatcagcccaagaccagccttcagggtggtcttcccaaccgcagacgaaatcagg
aggagcctcgacggctatgcgtctggtggatcaatacacaccaagattgcatccccacag
caggccaagcagctcgcatacttgaaaccaatcttttgccactgggcgaacgatgcgcca
ggcgggaaagaaatcagtaaagacacggccctgcaggatgccggtcgtcagcgagcagca
ccacatatcaagacatatattcgttacgggacgcagtccattgactgggctctgctgacg
tcagcgaacctgtctaaacaggcatggggggaggcggccagcgcagcgcaggaggtcaga
attgcctcctgggaagctggtgtcttagtctggccatcactagttgcagggacggacgag
gccattatggtgggtacattcaagacagatgcgccgggcgaggaagcgccatctggcgcg
ccatctagtactggaaatgtagtaggcctacgcatgccatacagcttgccgctccagctg
tatggaaaggacgagataccttgggttgcttctaatgagcacaccgaaccagattgggcg
ggacgcgtgtgccttagacagtaa

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