Verticillium dahliae: VDAG_00533 Help Entry VDAG_00533        CDS       T03450                                  Name (RefSeq) DNA repair protein RAD16   KO K15711   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27] Organism vda  Verticillium dahliae Brite KEGG Orthology (KO) [BR:vda00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:vda04121]     VDAG_00533    03400 DNA repair and recombination proteins [BR:vda03400]     VDAG_00533 Enzymes [BR:vda01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      VDAG_00533 Ubiquitin system [BR:vda04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     VDAG_00533 DNA repair and recombination proteins [BR:vda03400]  Eukaryotic type   TLS (translesion DNA synthesis) factors    Rad6 epistasis group     VDAG_00533 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_5 zf-RING_UBOX ResIII zf-C3HC4_4 zf-rbx1 zf-RING_6 zf-Nse zf-ANAPC11 zf-RING_10 RING_XB3-XBAT31 U-box Sina_RING zf-RING_4 Motif Other DBs NCBI-GeneID:  20701996 NCBI-ProteinID:  XP_009650205 UniProt:  G2WQ91 LinkDB All DBs Position 2 AA seq 931 aa AA seqDB search MSVPKRSHDVIDLTDDADEGGGRNETFSGAPQRKRHAPSSHPSQSSPSRGRKPSSQPSLS QRHNATSTSQSSWSPQVSQHWAPQNGRVYASSSQPIADDVEVIDLTQSNDEPPMEFYGSL PTKVVGVRYYAGNASAGEIVLCNREPHNQYDSNALQVTNVLGDQIGHIPRNVAAKLAPYL DRGEIILECQLSGEMNFYDCPIRLRVYGPSDRAARRALEDRLKKDRIFKAAELSSSRAEA EARRDGQARGEGFRGAGTETNAHLKARADAAELRMQQALNATKYEPPEGATMVDLVATSE TIDVRKGADAIKTMTEEQMAAMPMADEPAFLVSKLLPYQLQGLHWMLAQEDPQLPKKDSS DSVQLWRWHQNKRGMVNMATKFSVAGEAKLLSGGILADDMGLGKTLQVISLILSGTGSGP TLIVAPVSVMSNWQQQFDAHVRKDKAPKIHIHHGSAASEELSGYDIVITSYGKLAKERLE TTDSARGPLMSVDWRRVVLDEGHIIRNAKTQAARAACQLKAASRWVLTGTPIVNNLQDLQ SMLSFLHMTGGVEQPTIFNTVITRPLTWGHKRAEALLQNIMHDLCLRRRKDMAFVDLKLP PKTEYVHRITFRSDESEKYKVLLQEAQGVLQEYQSQARTGRVPFQSVLEKLLRLRQTCNH WTLCRARIDDLLKVLEGQDVVVLNDKNKAVLQQALRLFIETQEDCPICFDTLSEPVITHC KHVYCRRCITKVIELQRKCPMCRQPLGVDSLLEPAPEEGQDDDANAFDGETQSSKTEALL KIVQATCKDPQSKVVIFSQWTSFLNIIQTQIEEAGLKWTRIDGSMKPDKRDAAIAALVGL NLVAADTVILADSWWAPAIEDQAVDRVHRLGQKRPTTVWRLVMENTIEEQVLEIQAAKRQ LISKAFQEKSREKKTKETRMADIVKLLGWPS NT seq 2796 nt NT seq  +upstreamnt  +downstreamnt atgtcagttccaaagaggtctcacgacgtcatcgacctcacagacgatgccgacgaaggc ggtggtaggaacgaaaccttctcaggagcgcctcaacgcaagagacatgctccgtcatca cacccctcgcagagctcaccaagtcgaggacgcaaaccttcatcccagccgagcttgagc caaagacacaacgccacttctacgtctcagtcatcctggagtccacaggtgtcccaacat tgggcaccccagaatggcagggtctatgcatcatcgtctcagcccatcgcggatgacgtc gaggtcattgacctcacgcagtccaatgatgaaccgcccatggaattttacggatcattg cctaccaaggttgttggtgttcgatattatgctggcaacgcctcggcgggagagatcgtg ctgtgcaaccgagaacctcataatcagtacgattcaaatgctctgcaagtgaccaatgtt ttgggagaccagattggacacataccgcgcaatgtggctgccaaactcgcaccttacctg gatcgaggcgagataatactagagtgccaactgagcggcgagatgaatttctacgattgt cccatacgcctgagggtctacggtccaagtgatcgtgccgcccgcagagcgctggaagac cgcctcaaaaaagacaggattttcaaggctgccgagctcagctcaagtagggctgaggcc gaggcgagacgtgacgggcaagctcgcggcgaaggatttcgcggagccgggacagagacg aacgctcacctcaaagcgagggctgacgctgccgagctgcgtatgcagcaggctcttaac gcgacgaagtatgaaccgcccgagggtgcaaccatggtggatctcgtggcaacgagcgag acgattgatgtacgcaagggtgcggatgccatcaaaaccatgaccgaagagcaaatggct gccatgcccatggcggacgagccggcctttttggtgtcgaaactgcttccgtatcagctg caaggcttgcactggatgcttgctcaagaagacccccagctcccgaagaaggattcctcc gattctgtccaactgtggagatggcaccaaaacaagcgcggcatggtcaatatggcaacg aaattctccgtcgccggtgaggcgaagctgctgtcaggcgggattcttgccgatgacatg ggtctcggaaagacattgcaggtgatcagcttgatcctttcgggcacaggcagcggcccg accctgatcgtggcgcccgtgagcgttatgagcaactggcaacagcaattcgatgcacac gttcgcaaggacaaggcaccgaaaattcacatccaccacggctctgcggcctctgaagag ttgtccgggtacgacattgtcatcacaagctacggaaaactcgccaaggagcgtctggag acgacggattctgctcgtggaccgttgatgagtgttgattggaggcgagtcgtgctcgac gagggccatatcatccgcaacgcgaagactcaggcagcccgggcggcctgccagctcaag gccgcgtctcggtgggtgctcaccggcacgccaatcgtcaacaatctccaggatctccaa tcaatgctgtcgttcctccatatgacgggcggcgtcgagcagccgaccattttcaacacg gtcatcacgcgacccctgacctgggggcacaagagagcggaagcccttctccaaaatatt atgcacgatttgtgccttcgccggaggaaggacatggcttttgtcgaccttaaactcccg cccaagacagagtatgtgcatcgaatcacgttcaggagtgacgagagcgaaaagtacaag gtgctgctgcaagaggcgcagggcgtcctccaggaataccagagtcaggccaggactggc cgcgtgccattccagagcgtcctggagaagctgctacgcctgcggcagacatgcaatcat tggacgctctgtcgtgctcgtatagacgacttgctcaaggtcctcgagggccaagacgtc gtggtcctcaacgacaagaacaaggcggtcttgcagcaggcgctgcggctgttcatcgag acgcaggaggactgccccatctgctttgacacgctcagcgagcccgtcattacgcactgc aagcatgtctactgccggaggtgcatcaccaaggtcattgagctgcagaggaagtgcccc atgtgccgacagccgctgggcgtggatagtctgctcgagccggcccccgaggaaggccag gacgatgacgccaatgcgttcgacggcgaaacccagagctccaagacggaggcactgctg aagattgttcaggcgacgtgcaaggacccccagtccaaggttgtcatcttctcgcagtgg acgtcgttcctcaacatcatccagacccagatcgaggaggcagggctcaagtggacgcgc atcgacggcagcatgaagcccgacaagcgcgatgccgccatcgcggcgctcgtcggcctc aacctcgtcgcggctgacacggtcattctggcggacagctggtgggcgccggccatcgag gaccaggccgtcgaccgcgtgcaccggctgggccagaagcggccgacgacggtgtggcgc cttgtcatggagaacacaatcgaagagcaggtgctggagattcaggcggcgaagcggcag cttatcagcaaggctttccaggagaagagcagggagaagaaaacgaaggagacgcgtatg gcggacattgtcaagctattgggatggccttcctag

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