Verticillium dahliae: VDAG_00656
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Entry
VDAG_00656 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
vda
Verticillium dahliae
Pathway
vda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VDAG_00656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_00656
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
VDAG_00656
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
VDAG_00656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
20702119
NCBI-ProteinID:
XP_009650328
UniProt:
G2WQL4
LinkDB
All DBs
Position
2
AA seq
446 aa
AA seq
DB search
MVSARKRRLFKKRNKPGAVLKIMAAPSPTPSSGRPRKGYAEALKGDRPGESSKDEFPSLS
NNAQLGNANQSSMWATAGSRAVSGQVPRNTSTPLSSQGPQEDLYNSTSSSRGNGGFRFGA
QGTVGQPSQNSATPADDFPPLNRNANGEIGGERGAGLMSSLGFGAQAPSAAPSIPGSRAA
GNGLLNALSANNRSSDAQSPPQANATTAGSADEERKASLGVGMSAPTESPSQDASNSHSL
AGLDAAAHNGKARETEDGEASDAQDPLAGMAPIDKFGIKGLRTMMNNNPSYAALMHGMDP
NDLGLNVNSPDLISTQQYSLFDDTPPRPVVPSHRLPECYQVTNVQPIETKIQSFNEETLF
WIFYSCPQDVKQQLAAFELHSRNWRWHKKLHIWLTKDETMTPQTISPTHEQGYYVIWDIR
NWRKERRELTLHYEDLETSLGRPPAA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgcgcgtaaacgcaggcttttcaagaagcgcaacaagccgggagcagttctt
aagatcatggcagcgccgtcacctactccgtcgtctggaaggcccagaaagggctatgca
gaggctttgaaaggagaccgcccgggcgaaagttcgaaagacgaattcccctccctctcg
aacaacgctcaactcggaaatgccaaccaatcctctatgtgggcaacggcgggctcgcgg
gctgtgagtgggcaggtgcctcgaaacacgtctacgccactatcttcgcaggggcctcag
gaagacctgtacaactcgacatcttcatctcgaggaaatggtgggttccgcttcggcgcc
caaggaacggtgggccagccttcgcaaaactctgcgacgcccgcggatgactttccacca
ctgaatcgcaacgcaaacggcgagattggcggggagcggggggccggcctcatgtcgtct
ctggggttcggggctcaagcccccagtgccgcaccttccataccaggtagtcgggctgcc
ggcaacggtctgttgaacgccctctcggcgaacaacagaagctcagacgcccagtcgccg
ccgcaggccaacgctaccactgctggatccgcagatgaagaaaggaaagctagcctgggt
gtgggcatgtccgcaccaacggaatcgccgtctcaagatgcaagcaactcgcacagcctg
gcaggactcgacgcggcagcacataacggcaaggccagagagacggaggacggagaggca
tccgacgcgcaggacccgttagctggcatggcccctatcgacaagtttggaatcaagggc
ctgcgaaccatgatgaacaacaacccaagctacgctgcgttgatgcatggcatggatccc
aatgacctaggcctcaacgtgaactcgcctgacctcatctccacgcagcaatactcactg
ttcgacgacacaccgccacggcccgtggtgcccagtcaccggctgcccgagtgctatcag
gtcacgaacgtgcagccgatagagaccaagattcagagtttcaacgaagagacgcttttc
tggatcttctacagctgcccccaggatgtgaagcagcagctcgccgcatttgagctgcac
tctcgcaactggaggtggcacaagaagctgcacatctggctcacaaaggacgaaaccatg
acgcctcaaacgatcagtcctacccatgagcaaggctactacgtcatctgggatatccgc
aactggcggaaagagcggagagagttgaccttgcattacgaggatctggagacctcgttg
ggaaggccaccggcggcgtaa
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