KEGG   Verticillium dahliae: VDAG_00773
Entry
VDAG_00773        CDS       T03450                                 
Name
(RefSeq) coatomer subunit beta
  KO
K17302  coatomer subunit beta'
Organism
vda  Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:vda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vda04131]
    VDAG_00773
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vda04147]
    VDAG_00773
Membrane trafficking [BR:vda04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    VDAG_00773
Exosome [BR:vda04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   VDAG_00773
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_IFT140_1st NBCH_WD40 PEP5_VPS11_N Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N HEAT_GCN1
Other DBs
NCBI-GeneID: 20702236
NCBI-ProteinID: XP_009650445
UniProt: G2WQZ2
LinkDB
Position
2
AA seq 853 aa
MRIDVKRQLFARSERVKGIDFHPQEPWILTTLYSGHVYIWSYETQQIVKTFELTDVPVRA
GRFIARKNWIVCGSDDFQLRVYNYNTSEKITSFEAHPDYIRAIAVHPTQPFVLTASDDMT
IKLWDWEKGWKCVRVFEGHGHYVMGLAINPKDTNTFASACLDRTVKIWSLGSSTANFTLE
AHETKGVNYVDYYPHSDKPYLLTTSDDRTVKVWDYTTKSLIATLEGHTNNVSWACYHPEL
PVIISGSEDGTVRLWHANTYRFEQVLNYGLERAWCVSYQKGKQGVAVGFDDGLVVVKLGR
EEPAVSMDASGKLIWARHNEVVSSIIKGGDASVKDNTPISLPTKDLGSCEVYPQTLLHSP
NGRFVAVCGDGEYIIYTALAWRNKAFGSALDFVWGAKENSNDFAIRESATSVKVYKNFTE
KTGGLDVGFQAEGLSGGVLLGVKGQGGVSFFDWASGGLVRRIEVEPRQVYWSDSGELVTL
ACEDSFYVLRFSREAYNEALQNGEADEDGVEAAFEVITDINESVRTGEWVGDCFIYTNST
NRLNYLVGDQTYTVSHFDQPMYILGYIQRDSRIYLADKDVGVTSFALSLPVLEYQTLVLR
GDMDTAEELLSSVPQDQLNKIARFLEGQGHKELALEVATDSEHKFELALGLNQLDIALEL
AREADVEHKWKTVGDAALTAWDVALAQECFTHAKDLGSLLLLYSSTADREGLTKLAEQAE
AAGAHNVAFSAQWLAGNVEGCVETLVRTGRISEAVLFSQTYKPSLTTGVVAQWKESLDKS
KKGRVSKLLGVPTEDEELFPEWDEWLRLEREGGAETAAPVAKTNGNGAESGADAASEDDD
EAAEEEADASASE
NT seq 2562 nt   +upstreamnt  +downstreamnt
atgaggattgacgtcaagaggcaattgttcgcccgcagcgagcgggtcaaaggcatcgat
ttccaccctcaagagccatggatcctgacgaccctctactctggccatgtctacatctgg
tcgtacgagacgcaacagattgtcaagacctttgagctcaccgatgtccccgtccgcgcc
ggtcgcttcatcgcgaggaagaactggattgtctgcggctccgatgatttccaattgcgc
gtctacaactacaacacgtccgagaagatcacctccttcgaagcccaccccgactacatc
cgcgccattgctgttcacccgacgcagcccttcgtgctcaccgcatccgatgacatgacc
atcaagctctgggactgggagaagggatggaagtgcgtccgcgtattcgagggccacggc
cactacgtcatgggtctcgccatcaaccccaaggataccaacacgttcgcctcggcctgt
ctcgaccgcactgtcaagatctggagcctgggctcatccaccgccaacttcaccctcgag
gcgcacgaaaccaagggtgtcaactatgtcgactactatccccattccgacaagccatac
ctcctcaccacctcggatgaccgcaccgtcaaggtgtgggactacaccaccaagtcgctg
attgccacgctcgagggccacacaaacaacgtctcctgggcgtgctaccaccccgagctt
cccgtcatcatctccggttccgaggacggcaccgtgcggttatggcacgccaacacgtac
cgatttgagcaggtgctcaactacggcctcgagcgcgcctggtgtgtttcctaccagaag
ggcaagcagggcgtggcggtgggttttgacgacggtctcgtcgtcgtgaagctcggtcgc
gaggagccggccgtgtcgatggacgcctctggcaagctcatctgggccaggcacaacgag
gttgtgtcttccatcatcaagggcggcgacgcctccgtcaaggataacacgcccatcagc
ttgcccaccaaggatctcggcagctgcgaggtctacccgcaaaccctcctccactcgccg
aacggtcgattcgttgccgtgtgcggtgacggcgaatacatcatctacactgcgctggcg
tggaggaataaggctttcggctctgcgctcgactttgtctggggcgccaaggagaacagc
aacgactttgccattcgggaatcggccacgagcgtcaaggtgtacaagaacttcacggag
aagacgggtggtctcgacgtcggtttccaggccgagggcctcagcggcggtgtcctgctc
ggtgtcaagggccagggcggtgtgtccttctttgactgggccagcggcggtctcgtcagg
cgaattgaggtcgagccgagacaggtctactggtccgacagcggcgagctggtcaccttg
gcctgcgaggattcgttctatgtcctgcgcttctcgcgtgaagcatacaatgaggcgctg
cagaatggcgaggctgacgaggatggtgtcgaggccgcattcgaggtcatcactgacatc
aacgagagtgttcgcactggagaatgggttggcgactgcttcatctacaccaacagcaca
aaccgcctgaactacctcgtcggcgaccagacatacacagtgtctcacttcgaccagccc
atgtacatcctcggctacatccagcgcgactcccgcatctacctcgccgacaaagatgtc
ggtgtcacctcgttcgctctttcgctccctgtacttgagtaccagacacttgtgctgcgc
ggcgacatggacacggctgaggagctcctttccagcgtaccccaggaccagcttaacaag
attgcgcgattcctcgagggccagggtcacaaggagcttgcgctggaggtggcgacggac
tcggagcacaagtttgagctggcgctcggactcaaccagctggacattgcgctcgagctc
gccagagaggcggacgtcgagcacaagtggaagacggtgggtgacgctgccctcactgcg
tgggacgtcgcccttgcccaggagtgcttcacgcacgccaaggaccttggctcgctgctg
ctgctctactcttcgacggcggatcgcgagggcctcacgaagctggcggaacaggccgag
gcggcgggcgcgcacaacgttgcctttagcgcgcaatggctggccggcaacgtcgagggc
tgcgttgagacacttgtccggacaggcaggatatcagaggccgtgctcttctcgcagacg
tacaagcccagtctgacaacgggcgtcgtggcgcagtggaaggagagcctcgacaagagc
aagaagggccgcgtgtcgaagctgctcggcgtgcctacggaggatgaggagctcttcccc
gagtgggatgagtggctacgactggagcgtgagggtggtgcggagacggcagcccccgtg
gccaagacgaacggcaacggcgccgagtcgggtgcggacgcggcgtcggaggacgatgac
gaggccgccgaggaggaggccgatgcttcggccagcgagtag

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