Verticillium dahliae: VDAG_01192
Help
Entry
VDAG_01192 CDS
T03450
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
vda
Verticillium dahliae
Pathway
vda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VDAG_01192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_01192
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VDAG_01192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_27
DUF5740
AAA_29
AAA_21
Motif
Other DBs
NCBI-GeneID:
20702655
NCBI-ProteinID:
XP_009648373
UniProt:
G2WTR9
LinkDB
All DBs
Position
1
AA seq
1211 aa
AA seq
DB search
MVEKRATPARTPARLSKTPSGSTQKSITSFFSKPATSSATKAAASTPTSTATPTQKPPKM
ESPCLKESTNKSNTLSKIKRPANVTPVPSSDALEPPSSQENMDSTVTKKATITSNVLPSS
PSRKTKKAVNYAESSDEYEDPFDDVPAPRNRRRVRARGTILDDEDDFAADPDNFDPAEED
EDEEMADFIASDDSDEEPSSKKRKRPTKKAAPRKRTASAAPTSPIVEPATNGDDEDVDMD
DLPPHSTAQQWKFDPNAVVKAGSRAARPPATKKSSAVSKSKVKAHTQEPSDRYPWLANIT
DIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFFKKGKFFELYEND
ATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMRERD
DQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDLATYCAAIKESITDGIPSFGISFVD
CATGQFFITEFEDDVDLTKFETFVAQTSPRELLLEKSLLSSKALRILKNNTSPTTIWNYR
KPGLEFLDADVTRRELDTGGYFDGDGEKEGGWPAVLAEAKEKDLAMSSLGALVKYLQLLK
IEQSLLSQGNFEWYNPIRRNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFG
KRLFRQWVCHPLCDIDRINERLDAVDMLNSDRSVREQFSAQMTKMPDLERLISRIHAGVC
RPDDFVKVLEGFEQIEYTMSLLGAWGGGKGLVDRLLSSMPNLDEPLSYWKTAFDRMKAKN
DRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAELKCKTLKFTDIGKEIFQIEAPK
STKVPSSWRQMSATSSVKRYYFDALTELVRDLQEAEETHGQIMKEVASRFFRRFDADYAT
WLQAIRIISQLDCLVSLAKASSSLGEPSCRPQFVDEERSLVEFDELRHPCMLNTVSDFIP
NAIELGGNSAKINLLTGANAAGKSTVLRMTCTAVIMAQIGCYVPATSARLTPVDRIMSRL
GANDNIFASQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVAT
HVGCIGFFATHYHSLATEFENHPEVRARRMQIHVDEAERRVTFLYKLEDGVAEGSFGMHC
AAMCGINNRIIERAEVAAREWEHTSRLKESLEKAKTGCYIPLGMLSDVASLLRDEEEVGN
VDVLLRAVEAM
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagaagcgcgcaacaccggcgcgcacgccggcgagactgtcaaagacaccttca
ggcagcacccagaagtctatcacgagcttcttctccaagccagcaacttcctctgccacc
aaggcagcagcatccactccgacgtcaacggctacgccaacacagaagcccccaaagatg
gaatctccttgcctgaaagagtctaccaacaagtccaacacactctcgaagatcaagcgc
cctgccaatgtaacacccgttcctagcagtgacgcccttgaaccgcccagctcccaggag
aacatggattccacagtgaccaagaaggcgactatcacttccaatgtcctacccagcagt
ccttcccgtaagacgaagaaggccgtgaactatgccgagtcctcagacgagtacgaagat
cctttcgacgacgtaccagccccccgaaaccgtcgccgtgttagagctcgtggcacgatt
ctggatgacgaagacgactttgccgcagacccagacaacttcgatcctgctgaagaggat
gaagacgaagaaatggccgacttcatcgcctcggatgactccgacgaagaaccgagttca
aagaagcgaaagcgacccactaagaaagcagctcctcgcaagaggaccgcctcggcggct
cccacctcgcctattgtggagcctgctacgaatggtgatgatgaggatgttgatatggat
gacctgcccccacactcgacagcacaacagtggaaatttgaccccaatgccgtggtcaaa
gccggctcgagagccgctcgcccacccgccacgaagaagtcatcagccgtgtccaaatcg
aaggtcaaggcccatacccaggagccgagcgatcgatacccgtggcttgcgaatatcact
gatatcgaccgcaagtctcccggcgaccctgagtacaacccatccagcatttacatcccc
cctggagcatggaacaagttttccccctttgagaagcaatactgggcgattaaacaaaat
ctgtgggacacgatcgttttcttcaagaagggcaagttcttcgaactgtacgaaaacgat
gcgacgattggccatcagcttttcgacttcaaaatgacggacagggtcaatatgcgcatg
gtcggcgtgcctgagagctctctcgacatgtgggtgaatcaattcgtagccaaaggcttc
aaggtcgctcgcgttgaccagatggagtctgctcttggcaaggagatgcgcgaacgcgat
gaccaagcggcgaagagcaaaaaggttgacaagattatccggcgtgagctggcgtgcatt
ctgaccggaggcacgctggttgaaggcagcatgcttcaggacgatctcgcaacctactgc
gctgctatcaaggagtccatcacggatggcattccgtcttttggcatttcgttcgtggac
tgcgccactggccaattcttcatcacggagttcgaggacgacgttgacttgaccaagttc
gagacctttgtggcccaaacatcccctcgtgagcttttactagagaagtcactcctctcg
agcaaagccctgcggatcctaaagaacaacacttcgccaaccaccatctggaactacagg
aaaccaggtctcgaattcctagatgctgatgtcactcgccgggagcttgacacgggcggg
tatttcgatggtgacggcgagaaggaaggaggctggcccgctgttcttgcagaagcaaag
gagaaggaccttgccatgtcttcgctgggtgccctggtaaagtatctccagctgctcaag
attgagcagagtctcttgtcgcagggcaattttgagtggtacaaccctattcgacgaaac
gggaccctcattctcgacggtcagacgctcatcaacctggaggtatttgccaacagcgca
aacggcagcacagaaggaacgctgttcaccctcctcaacaaatgtgtcacgccgtttggc
aagcgccttttccgccagtgggtgtgccatcctctctgcgacattgaccggatcaacgag
cgcctggacgctgtggacatgttgaactcggaccgcagcgtccgtgagcagttctccgct
cagatgacaaagatgccggaccttgagaggctgatctctagaattcacgctggggtatgt
cggcctgatgactttgtcaaggttctcgaaggcttcgagcagatcgagtacacaatgagt
ctcttgggtgcgtggggcggtggcaaaggtctcgtcgacaggcttctatcctccatgcca
aacctagacgagccgctcagctactggaagacggcttttgacaggatgaaggcgaagaat
gacagaatgttcctcccggaaagaggcatcgaagaggactttgacgagagccaagaccgg
attgccgaaatcaaaaaggacctgggcaagcttcttgagaagaagaaggcagagctgaaa
tgcaagacgctcaagttcacagatatcgggaaagagatcttccagatcgaggcacccaag
tcgaccaaggttccttccagctggaggcagatgtcggccacgtccagcgtcaagcggtac
tatttcgatgccctgaccgagctggtacgggatttgcaagaagctgaagagacccacggc
cagatcatgaaggaagtcgcttcgcgcttcttccgtcgtttcgacgcggattacgcgacg
tggctgcaagcgatccgtatcatctcccagctcgactgcctggtcagccttgcgaaggct
tcgtcgtctttgggcgagccaagctgccgtccgcagtttgttgacgaggagagaagcctg
gtggagtttgacgaactgcgtcacccgtgcatgctgaacacagtttctgacttcatcccc
aacgccatcgaactgggcggtaactcggccaagatcaaccttctcacgggcgccaatgcg
gccggaaagtcaacggtcctccgcatgacctgcacagccgtcatcatggcccagatcgga
tgctacgtccccgcgacctcggcccgcctgacacccgtggaccgcatcatgtctcgcctc
ggcgccaacgacaatatttttgcctcgcagtccaccttcttcgtcgagctctccgagaca
aagaagatcctcgccgaggcgacgccccgctcgctcgtcatcctcgacgagctcggccgc
ggcacaagctcctacgacggcgtcgccgtcgcccaggccgtcctgcaccacgtcgccacg
cacgtcggctgcatcggcttcttcgcgacgcactaccactccctcgccaccgagtttgag
aaccaccccgaggtccgcgcccgccgcatgcagatccacgtcgacgaggccgagcgccgc
gtcaccttcctgtacaagctcgaggacggcgtcgccgagggcagcttcggcatgcactgc
gccgccatgtgcggcattaacaatcgcatcattgagcgcgcagaggtcgccgcccgcgag
tgggagcacacgagccgcctgaaggagagccttgagaaggccaagacgggctgctacatc
ccgctgggcatgctcagcgacgtcgcatctctgctgcgggacgaggaggaggtgggcaat
gtcgacgtgctgcttcgggctgtggaggctatgtga
DBGET
integrated database retrieval system
