Verticillium dahliae: VDAG_01209
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Entry
VDAG_01209 CDS
T03450
Name
(RefSeq) WD repeat-containing protein
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
vda
Verticillium dahliae
Pathway
vda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
VDAG_01209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vda04121
]
VDAG_01209
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_01209
Ubiquitin system [BR:
vda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
VDAG_01209
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
VDAG_01209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
MIOS_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
20702672
NCBI-ProteinID:
XP_009648390
UniProt:
G2WTT6
LinkDB
All DBs
Position
1
AA seq
584 aa
AA seq
DB search
MDQQQQQQQYPPGPPRRTGTYGSQHDELHMPPAGMAQSGPTSPREYPSSASGPQIKLDQA
SPSTASYHSSSSVPNVLQPGGMGSGSRPSPMSANTAPSLPTLQSPNQQSQQSEYAAPSKP
PTLSLSHSYSRSSPAAGFDGSSSFSPYTPTTPGGTTPSQYMSPSDGRYNAPGSQRVVSNT
PLGLADIRPRADSSMSDGVPGTSGYDLANAQPGASNYLAPWALYAFDWCKWTPQGNSAGK
LAVGSYLEDGHNFIQILDTHVVPSPSDGQQSGGAKHSLEFSKIAEATHSYPVTRLLWEPP
SSQKQSTDLLATSGDHLRLWSLPSESAPTQQSNSINNKRETTATKLTPLALLSNSKTPDH
TAPLTSLDWNTVSPSLIITSSIDTTCTIWDIPSLTAKTQLIAHDKEVYDVRFCANSVDVF
VSCGQDGSVRMFDLRSLEHSTIIYEPTSKDERDANGGRISPTLAQQTMTNPPPLMRLATS
PHDTHLLATFAQDSNIIRILDVRQPGQALLELRGHGGSVNCVEWSPLRRGTLASGADDCQ
VLIWDLLNSTGAMNGAGQPDSYRNPSASWQCDHEIGNLGWPVPC
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcagcagcaacagcagcagtatcctcccggccctccacgaaggactggcacg
tacggctcgcaacacgacgaattgcacatgccccccgcaggcatggctcagtcaggtccc
acctcgccgcgcgaatacccctcctccgcctcggggccccagatcaagctggaccaggcc
tcgcccagcactgcttcataccacagctcatcgtctgtgcccaacgtcttgcaacccggc
ggcatgggaagcggctcgcgaccctcgcccatgagcgccaacactgcgcccagcctcccc
acgctgcagagccccaaccagcagtcccagcagtccgagtacgcggcgccgtcgaaaccg
ccgaccctcagcttgtcgcacagctactctcgctcttctcctgcggcgggcttcgacggc
tcgtctagcttttcgccctacacaccgacaacgcctggtggcacgacgccgtcgcagtac
atgtctccctccgatggaagatacaacgcaccagggtcccagagggtcgtgtcgaacacc
cccctgggtctggctgacatccggccccgtgcggattcgagcatgtcagatggcgtcccg
ggcacttctggctacgacctggcgaacgcgcagcctggtgccagcaactacctggcgccg
tgggcactgtatgcttttgattggtgcaagtggacacctcaagggaacagcgcaggcaag
ctcgcagttggcagctacctcgaggacggccacaactttatccaaatccttgacacccat
gtggtgcccagtccatccgatggccagcaatcgggcggcgcaaagcatagcttagagttc
tccaagatcgccgaggccacacattcgtaccccgtcacgcgacttctctgggagcctcct
tcgtcgcagaagcagtctaccgacctgcttgccacgtcaggggaccacctccggctctgg
tcgctgccctccgagtcggcgcccacgcagcaaagcaactcgatcaacaataagcgggaa
acgaccgccaccaaattaacaccgctcgctctcctgtccaactcaaaaacccccgaccat
actgcgcccctgacatctctggactggaacaccgtttctccgagcttgatcatcacctcc
agcattgatacgacttgcaccatctgggatattccatcgttgacggccaagacccagctg
attgcgcacgacaaggaggtctacgacgtacgcttctgcgccaatagtgttgacgtgttt
gtgagctgcggtcaagacggcagcgtacgcatgtttgatcttcgcagcctcgagcacagt
accatcatctacgagcccacgtccaaggacgaacgagacgccaatggaggaagaatcagt
cctactctggcccagcagaccatgacgaaccctccgcccttgatgaggcttgctacgtca
ccccacgatactcaccttctcgcgacctttgcgcaagactcaaacatcatccgtattctg
gacgtccgacagcccggccaggctttgctagagctccgcggtcacggcggctctgtcaac
tgtgtggagtggtcgcccttgagaagaggcacgctggcttcgggagcggatgactgccag
gtcctgatctgggaccttcttaactcgactggagccatgaacggagctggccagcccgat
agctaccgcaacccatcggcaagctggcaatgtgaccacgagattggaaacctaggctgg
ccggttccttgctag
DBGET
integrated database retrieval system
