Verticillium dahliae: VDAG_01211
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Entry
VDAG_01211 CDS
T03450
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
vda
Verticillium dahliae
Pathway
vda03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VDAG_01211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_01211
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_01211
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
VDAG_01211
RNA polymerase I system
VDAG_01211
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
VDAG_01211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5_N
KOW5_SPT5
Spt5-NGN
KOWx_SPT5
CTD
KOW4_SPT5
KOW2_Spt5
KOW
KOW1_SPT5
DUF3912
Cornifin
Motif
Other DBs
NCBI-GeneID:
20702674
NCBI-ProteinID:
XP_009648392
UniProt:
G2WTT8
LinkDB
All DBs
Position
1
AA seq
1062 aa
AA seq
DB search
MASNYNQFDDSDDDEAFNPAPADVSDDENANGDADHQRSDARDHSPAHDDEEEESPVAAK
SGSRAVNDDEAEEDEDDEDDQPRGRAGDDDEDDEDDEDDEDDVQQGHRRKRHRDRRAAFF
DIEAEVDDEEDGEDDEKDGEEIGDFIDNEHPDDVVDTGRLNDDRRHRELDRQRELESSMD
AEKQAEILRQRYGNRRAAKGFGDSTVVPKRLLMPSVDDPTIWAVRCKEGKEREVVFSIQK
RIQERMGTKEEMAIISAFERGGTNSVMKGYIYVEAARSGDIMAALDGMLNVYPRSKLILV
EIKDRPDLLRVTKTATLEPGAWVRLKRPQKHAGDLGQVVDVTESGLEARVRFIPRLDYGV
RDDSATQITADGKRKRPVGMPGPRPPQRLFNEAEARKRHPRFIQGNPQTKIWTYMGDDFE
NGFQVKEYKIQQLVVTDVNPTLEEVTRFASGAEDGTENLDLKALAASLKDSNTNVTYLPG
DVIEVYEGEQKGVVGRATTVSGDIVTLEVIEGVLAGQVIEVPTKGLRKRFKEGDHVKVIG
GSRFRDEVGMVVKIQDDRVTFVTDQTNMEVTVFSKDVREASDMGGQGSLGQYSLLDLVQL
DPTTVGCIVKVDRESVAVLDQNGDARQVVPSQITNKLPQRKIAVAADRNGSEIRLDDVVR
EWGGQQRQGKIIHIYRSYIYLHSHDNKENAGVFVTRAGNVTTIAAKGGRVVPSGPNLDQM
NPAMKRLPAGSDGKMAPPKSFGRDRALGQTVIIKKGGYKGLLGIVKDTTETHARVELHTK
SKTVSVPKDHLSYKDKNTGAVIDIGGRGGRGRGGGFGSGGGRGGGDSGWQGGRTPMAGTE
RTPAWGSRTPAANHGGRTPAWKSSGSGDLGSRTPAWADGSRTAYGGDGSRTAYGSGNRTP
AWQSGARTPAPGGDAFGLGSRTPAYGADTWGSGSKTPAYGGASAPTPAASGGDSWGGYSA
SAAYDAPTPGAGLSAPTPGALNAPTPGAYSAPTPGAVNAPTPGGWAGGWGGADAAPTPAA
AAPTPAASGFSSGAGYYSAPTPAAYGAPETPAASGPRYTDDD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaactacaatcagttcgatgactccgacgatgacgaagctttcaacccggcc
cccgccgacgtctctgatgacgagaatgccaacggcgatgctgatcaccagaggagcgac
gcaagggatcacagccctgcccacgacgatgaagaggaggagtcgccggttgccgccaag
tctggaagtcgtgctgtgaatgacgacgaggctgaagaggacgaagatgatgaagacgat
cagccacggggcagggccggcgatgacgatgaggatgacgaagatgacgaggatgacgag
gatgatgttcagcagggtcatcgtcgcaagcgccaccgagacaggcgcgccgctttcttc
gatatcgaagccgaggtcgacgatgaggaagacggcgaggatgacgaaaaagacggcgaa
gagataggagacttcatcgacaacgaacatcctgacgacgtcgtcgacaccggaagactc
aatgatgatcgcaggcaccgcgagcttgaccgtcagcgagagctggagtcgagcatggac
gccgagaagcaagctgagatcctccgccaacgttacggcaatcgtcgcgcagccaagggc
ttcggtgactctaccgtggttcccaagcgtctactgatgcctagtgttgacgatcccacc
atttgggccgtgcgatgcaaggaaggaaaggagcgagaggttgtcttctctattcagaag
aggatccaagagcgcatgggcacaaaagaggagatggccatcatctctgcctttgagcgt
ggcggcaccaactcggtcatgaagggctacatttacgttgaggcagcgcgttctggcgat
attatggccgcactcgatggcatgctcaacgtctacccccggagcaagctgattctggtt
gagatcaaagaccgtcccgatcttctacgcgtcaccaagaccgcaaccctagagccaggc
gcgtgggttcggctcaagaggccacagaaacacgctggcgacctgggtcaagtcgttgat
gttaccgagagcggcctcgaagctcgtgttcgtttcattccccgactggactatggtgta
cgggacgactctgccacccagattacggctgatggcaaacgcaagcgtccggtcggtatg
cccggcccccggcctccgcagcgcctctttaacgaggctgaggctcgcaagcgacaccct
cggttcatccaaggcaaccctcaaaccaaaatctggacctacatgggagatgatttcgag
aatggcttccaggtgaaggaatacaagattcagcagctggttgttaccgatgtcaacccc
actctagaggaggtcacccgtttcgcctcaggtgccgaggacggcacggaaaacctcgat
ctgaaggcgcttgctgcaagcttgaaggacagcaacaccaacgtcacatacctgcccggc
gatgtcattgaggtgtacgagggtgagcagaagggcgttgttggtcgagctaccaccgtt
tctggtgacattgtcaccttggaggttatcgagggtgtcttggcgggtcaagtcatcgaa
gtgcccaccaaaggcttgcgaaagcggttcaaggagggtgaccatgtcaaggtcatcggt
ggtagcaggttccgggatgaagttggtatggttgtcaagattcaagacgaccgtgtcacc
tttgtcaccgatcagaccaacatggaagtcaccgtcttcagcaaggatgtacgcgaggca
agcgacatgggcggccaggggtccctcggccagtactcgctgcttgatcttgttcaactg
gatcccacgactgtcggatgcatcgttaaagtcgatcgcgaatcggtcgctgtcctcgac
caaaatggcgacgcccgtcaagttgtgccgtcgcaaatcaccaacaaactccctcagaga
aagattgctgttgcggccgacagaaacggttcagagatccgccttgacgacgttgtccgt
gaatggggtgggcagcagagacagggcaagatcatccacatctaccgatcttacatctat
ctgcacagccacgacaacaaggagaatgccggcgtatttgtgaccagggcaggcaacgtc
accacgatcgcagccaagggtgggcgcgtggtccccagcggccccaatctggaccagatg
aaccctgccatgaagaggcttcctgctggctctgatggcaaaatggcgcctcccaagtcc
tttggtcgtgatcgcgcgcttggccagactgtcattatcaagaagggcggctacaagggc
ctgctgggtatcgtcaaggatactacggaaacacatgcacgggttgagctgcataccaag
agcaaaaccgtcagtgtgcccaaagaccatctcagctacaaggacaagaacacgggagcc
gttatcgacattggtggccgcggaggccgtggaaggggcggcggcttcggcagcggaggt
ggtcgcggcggcggcgactcgggctggcagggaggtcgcacacccatggccggcacggag
cgtactccggcgtggggctctaggacgcccgcagcgaaccacggtggtagaacccccgct
tggaagtcgagtggatcgggtgatctgggttcccgcacgcctgcatgggcggatggctca
cgcacagcttatggaggtgatggcagccgtaccgcctatggcagcgggaatcgaacaccg
gcgtggcaatctggtgcccgtacgcctgcccctggtggcgacgcgttcggccttggatcg
aggacgccagcttacggcgctgatacctggggctccggatccaagacgcccgcctatgga
ggagcctcggcgccaacgcccgctgccagtggaggtgattcatggggcggctactcagct
tccgccgcctacgatgctcccacgcccggtgcaggcctcagcgcacccacacccggagca
ctcaatgcccctacaccaggcgcctactcggcccccacacctggagccgtcaacgcgcca
acgcccggcggctgggccggcggttggggcggtgcggatgctgctccgaccccagcggcc
gctgcgcccacacccgctgccagcggtttctcatccggtgcgggctactacagcgcgccc
acaccagcggcatacggcgcgcccgagacacccgcagcgagcggtcctcgctacacggat
gacgattag
DBGET
integrated database retrieval system
