Verticillium dahliae: VDAG_01351
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Entry
VDAG_01351 CDS
T03450
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
vda
Verticillium dahliae
Pathway
vda03013
Nucleocytoplasmic transport
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDAG_01351
03015 mRNA surveillance pathway
VDAG_01351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_01351
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VDAG_01351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
PEHE
Motif
Other DBs
NCBI-GeneID:
20702814
NCBI-ProteinID:
XP_009648532
UniProt:
G2WU78
LinkDB
All DBs
Position
1
AA seq
548 aa
AA seq
DB search
MAARGSRSPAAAAAATAKRNYGSPIRSSPERHSFSDYLNEDRNSELSHREALENARLEHE
RVRLNALRIGKLHQLQEEQRRAEDDRRRIAEEAQRLRALQLREQERLKEEERVRAEQQKL
RDLQAQKVPELPPQPKPQPPPAVKPPAAPAVNGADAVVKKEESPAATTQPAPTTTPQTGL
LKTPSPFAPVQKPAQTTPAPGATPQLNGAQAAAAAPAAVANAAAPAVAGLSTSDRYAQIH
QELKKLRKELDKQSKVAGSPLKGKLGDMRRQARKAMGQLTAGKGANAKPINTIVATLKES
LDGSVPSYLVDGSIFVADSRDPVEGAVHNGPQLPAVFIYLLSHLSKAMIHQFASEVGANP
KSAEPIGIVAAHLFSNPDFHWRGKSMIDILIAKFRVACPVLFGARGNDRTEAGRLAVGWR
REDGRWISEQAHSDRMTGLGAGFASISLRDFSKASKKNPYPPSHYWTAMAKIVNSPPALI
SNTQYTVLKAMIDGHETRFLQFYGNAAIEALRTALVEFPKKAPATSHTAQALQVLGQVLQ
RDSGLALA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgcggctcgcgctcccctgctgccgctgctgctgctacggcaaagaggaac
tatggcagccccatccggtcgagtcccgaacgacactccttttccgattacctgaacgag
gaccgcaattccgaactgagccatcgtgaggccctcgagaatgccagactcgagcatgag
cgggtgaggctgaatgcccttcgaatcggcaagctccaccaactgcaggaagagcagcgc
cgcgcagaggacgaccgacgtcggatcgccgaggaagcacagcggctcagggcgctgcag
ctgagagagcaggagaggctgaaggaggaggagagggtacgggcagagcaacaaaagctg
cgcgacttgcaagcccaaaaggttccagagcttccgcctcagccgaaaccgcaaccaccg
ccagcggtcaagccgccagctgcaccggcggtcaacggtgccgatgccgtcgtgaagaag
gaagagtcgccggcagccacgacacagccagcaccgacgacgacacctcagacgggcttg
ctcaagacgccttcaccctttgcgcctgtgcagaagccagcacaaacgactcccgctcct
ggagcgacgccgcaactcaatggcgcccaagctgctgcggcggcgccggcggccgtcgcc
aacgcagctgcacctgctgtggcaggtctttccacctcggaccgatacgcacaaattcat
caggagctgaagaagctccgcaaagagcttgacaaacagtccaaagttgctggctcgccc
ctgaagggtaaactcggagacatgcgtcgtcaagcacgcaaggcaatgggtcagctcaca
gccggcaagggcgccaacgcgaagccgatcaacacaatcgtcgcaaccttgaaagagtcg
ctcgacggctcggtgccgagttatctggtcgacggatcgattttcgtggccgattcacga
gaccccgttgagggtgcagtgcacaatggcccgcagctgccagccgtattcatctacctc
ctgagccacttgtcaaaggccatgattcaccagtttgcgagcgaggtcggcgccaacccg
aaatcggcggagcccattggcatcgtggcagcgcatctgttctcgaatcccgactttcac
tggcgcggcaagtccatgatcgacattctgatcgccaagttccgggtcgcttgccccgtt
cttttcggcgctcgcggcaacgatcgaaccgaggcgggtcgcctggcggtcggctggagg
agggaggacggccgctggatctcagaacaggcacactcggaccgtatgacaggactgggc
gccggctttgcgtccatatcgctgcgcgactttagcaaggcgtccaagaagaacccgtac
ccgccgagtcactactggacggccatggccaagatcgtcaactcgcctccggccctcatc
tcgaacacgcaatacacggtgctcaaggccatgattgacgggcacgagacgcgttttctg
caattttacggcaacgcggccatcgaggccctgcgtacggctctggtcgagtttcccaag
aaggcacccgccacgagccacacggcgcaggcgctgcaagtcttgggacaggtcctgcag
cgggattcgggtctcgctctggcctga
DBGET
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