Verticillium dahliae: VDAG_01612
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Entry
VDAG_01612 CDS
T03450
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_01612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vda03000
]
VDAG_01612
03021 Transcription machinery [BR:
vda03021
]
VDAG_01612
Transcription factors [BR:
vda03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
VDAG_01612
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
VDAG_01612
RNA polymerase III system
TFIIIB
VDAG_01612
RNA polymerase I system
SL1/TIF-1B
VDAG_01612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
20703075
NCBI-ProteinID:
XP_009648793
UniProt:
G2WSL6
LinkDB
All DBs
Position
1
AA seq
249 aa
AA seq
DB search
METSNITTHPTTVEQAKAFTAPGSLSFPGGAQEFAPLAPNGQVNNQQVANGNGVTPATPA
ATPGALVGGSGLTPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIREPKT
TALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDIKFPIR
LEGLASRHHNFSSYEPELFPGLIYRMIKPKIVLLIFVSGKIVLTGAKVREEIYQAFEMIY
PVLQDFRKV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccaacataaccactcatcccaccacggttgagcaggccaaggccttcact
gcgcccggctctctgtccttccccggcggcgcccaggagtttgctcccctggctcccaac
ggtcaggtcaacaaccagcaggtcgcaaacggcaatggggtgactcccgcgacccccgct
gcgacgcctggtgccttggtgggcggtagtggcctcacacccacgcttcagaacatcgtt
gccacggtcaatctcgattgccgcctggacctcaagacgattgccctgcacgcgaggaat
gccgagtacaaccccaagcgtttcgccgctgttatcatgcgtatccgcgagcccaagacg
accgcgctgatcttcgcctctggcaagatggtcgtcactggtgccaagtccgaggatgac
tcgaagcttgcctcgcgcaagtacgctcgcatcatccagaagctcggcttcaacgcaaag
tttaccgactttaagattcagaacattgtcggctcgtgcgacattaagttccccattcgt
ctcgaaggtctggcgtcccgccatcacaacttcagctcctacgagcctgagttgttccct
ggtctcatctaccgcatgatcaagccgaagattgtgctcctcatcttcgtcagcggcaag
attgttctcacgggcgccaaagtccgtgaggagatttaccaggcctttgagatgatctac
cccgtgctgcaggatttccgcaaggtctaa
DBGET
integrated database retrieval system