KEGG   Verticillium dahliae: VDAG_01644
Entry
VDAG_01644        CDS       T03450                                 
Name
(RefSeq) pre-mRNA-splicing factor slt-11
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_01644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_01644
Spliceosome [BR:vda03041]
 Complex B
  Other components
   Prp19-related factors
    VDAG_01644
 Complex C
    VDAG_01644
SSDB
Motif
Pfam: STL11_N RRM_1 RRM_YTH1 RRM_occluded Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 20703107
NCBI-ProteinID: XP_009655968
UniProt: G2WVK8
LinkDB
Position
7
AA seq 381 aa
MPPQIKQDLNRSGWESTDFPSVCESCLPDNPYVKMLKEDYGAECKLCTRPFTVFSWSADS
AHGRKKRTNICLTCARLKNCCQTCMLDLSFGLPIVVRDAALKMVAPGPSSDINREYFAQN
NEQAIEEGRAGVEEYEKTDEKARELLRRLATSKPYFRKGKAIEGADAGGQGGSSRGGDPA
VGAGVGGAGPIRTGDSRAAAAAGAGPGGRAKQAFPSAAQLPPGPQDWMPPQDKNIMSLFV
TGVEDDLPEHKIRDFFKAHGKIKSLICSHMSHCAFVNYETREGAERAAAECKGRAVIAGC
PLRVRWGVPKAIGTMDKEQRGHMLRDGRQIQGGARKAGQQGGQKQLTGGGGADEGESSHG
AVAAPPPGADDGPQYASLAGE
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgccgcctcagatcaaacaggacctcaaccgctctggttgggagtctactgactttccg
tccgtatgcgaaagctgccttcccgacaacccatatgttaagatgctgaaggaagactac
ggcgccgagtgcaaactttgtacgcgaccctttaccgtcttcagctggagcgccgacagc
gcccacggtcgcaaaaagaggacgaacatctgcttgacgtgcgcacgactcaagaactgc
tgtcagacatgcatgctcgatctctccttcggcctaccaatcgtcgttcgagacgctgcc
ctgaaaatggtggcacccggtccctcctccgacatcaacagggagtactttgcgcaaaat
aacgagcaagcaatcgaagagggccgcgctggcgtcgaagagtatgagaagactgacgaa
aaggcgcgcgagctcttgcgccgactagcgacaagtaagccgtacttcaggaaaggcaag
gccatcgagggtgcggacgcggggggccaaggggggtcatctagagggggagaccctgcg
gtaggtgccggcgtgggcggtgctggtccgattcgcaccggggactcgagagccgcggct
gcggcaggcgccgggcctggaggcagagcgaaacaggcgtttcccagtgctgcgcagctg
cctcccggccctcaggactggatgccacctcaagataagaacatcatgtcgctctttgtc
acgggtgtcgaggacgacctgccagaacacaagatcagggacttcttcaaggcccatggc
aagatcaagagtttgatctgctcacacatgtcgcattgcgcctttgtcaactacgaaacg
cgcgaaggtgccgagagggctgcagcagagtgtaaggggcgcgccgtcattgcaggttgt
ccgctcagggtccgttggggtgtgcccaaggccatcggtaccatggacaaggagcagcgc
ggacatatgctcagggatggtcgccagatacagggaggggcgagaaaagcagggcagcag
ggtggccagaagcagcttacgggcggcggaggcgcagacgagggcgagagcagccacggc
gcagtcgcggcgcctcctcccggagccgacgacgggccccagtatgccagtctggcgggc
gagtga

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