KEGG   Verticillium dahliae: VDAG_01848
Entry
VDAG_01848        CDS       T03450                                 
Name
(RefSeq) Poly(A)+ RNA export protein
  KO
K14298  mRNA export factor
Organism
vda  Verticillium dahliae
Pathway
vda03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDAG_01848
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_01848
   03036 Chromosome and associated proteins [BR:vda03036]
    VDAG_01848
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     VDAG_01848
Chromosome and associated proteins [BR:vda03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    VDAG_01848
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WDR55 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Pep3_Vps18 Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 20703311
NCBI-ProteinID: XP_009656172
UniProt: G2WW62
LinkDB
Position
7
AA seq 358 aa
MSGLFGSASSSSASNTVGDLKSDVALSNPPEDTVSDLAFSPATNQTNDFLAISSWDKKVR
IYEVTGNGQSEGRHAYDHEGPVFNVDFSKDGTKVISGGADKVVKCCDLGSRQEVKVGEHD
QPVRSVRFFESSGNQMVVSGSWDKTVKYWDMRQQAPAATLQCQDRVYSLDVKNDLLVIGT
ADRYINIVNLKNPTTFYKTLQSPLKWQTRVVSCFTDAAGFAIGSIEGRCAIQYVEDKDSS
LNFSFKCHRDPPQNNITNVFAVNDISFHPVHGTFSTAGSDGTFHFWDKDAKHRLKGYPNV
GGSITSTKFNKNGSIFAYAVGYDWSKGFQHNTQQLQTKVMLHPVQQDECKPRPTMKKR
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtctggacttttcggcagcgcgtcgtcttcgtcggccagcaacaccgtcggcgacctt
aagtcggatgtcgctttgagcaacccgcccgaagataccgtctccgaccttgccttttcc
cccgccacaaatcagaccaacgacttcctcgccatctccagctgggacaagaaggtcagg
atatacgaggtcacgggcaacggccagagcgaaggaaggcacgcatacgaccacgaggga
cccgtcttcaacgtcgacttttccaaggatggcacaaaggtcatttccggcggcgcagac
aaggtcgtaaagtgctgcgacctcggctcgcggcaggaagtcaaggtcggcgagcacgat
cagccggtgcgcagcgtgcgctttttcgaatcaagcggcaaccagatggtcgtgtccggc
tcgtgggacaagacggtcaagtactgggacatgcgacagcaggcgcccgccgcgacgttg
caatgccaggaccgcgtctactcgctcgacgtcaagaacgacctccttgtcatcggcacg
gcggaccgctacatcaacattgtcaacctcaagaacccgacgaccttttacaagacgctg
cagagccctctcaagtggcagacgcgtgtcgtgagttgcttcaccgacgccgctggtttt
gctatcggcagtatcgagggccggtgcgccattcagtatgtggaggacaaggacagcagc
ctaaacttttcattcaagtgccaccgtgacccgccccagaacaacatcaccaatgtcttc
gccgtcaacgacatctccttccaccccgtgcacggcaccttcagcacggccggctcggac
ggaacgttccacttctgggacaaggacgccaagcaccgtctcaagggctaccccaacgtc
ggcggaagcatcacgtcgacaaagttcaacaagaacggctccatctttgcctacgccgtg
ggctacgactggtccaagggcttccaacacaacacgcaacagctgcagaccaaggtcatg
ctccaccccgttcagcaggatgagtgcaagcccaggcccacaatgaagaagcggtaa

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