Verticillium dahliae: VDAG_02253
Help
Entry
VDAG_02253 CDS
T03450
Name
(RefSeq) DNA mismatch repair protein msh-2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vda
Verticillium dahliae
Pathway
vda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VDAG_02253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_02253
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VDAG_02253
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
AAA_22
Motif
Other DBs
NCBI-GeneID:
20703716
NCBI-ProteinID:
XP_009656577
UniProt:
G2WVB2
LinkDB
All DBs
Position
7
AA seq
922 aa
AA seq
DB search
MSSRPELKVDDEHGFIRYFKSLPEVHEDTIRIFDRGDWYTAHGEDANFIARTVYKTTSVV
RQLGRDDKSGLPSVTMTVTVFRQFLREALYKLSKRVEIYQSTSGRMNWKVVKQASPGNLQ
DVEEELGGQFEAAPMILAVKITAKASEARSVGVCFADASVRELGVSEFLDNDLYSNFEAL
LIQLGVRECLIQADKAEKDKRDPELTKLRQIIDNCGVAVSERSAVEFGTKDIEQDLARLL
KDERAVTLLPQTELKLSMGSAAALIKYLGVLHDPSNFGQYQLYQHDLAQFMKLDAAALKA
LNLMPGPRDGAKSMSVYGLLNHCKTPNGSRLLSQWLKQPLMSKQDIEKRQQLVEAFASDT
ELRQTMQEEHLRSVPDLYRLAKRFQRKKANLEDVVRAYQVIIRLPGFLGTLEGVMDEAYR
DPLDEAYTSKLRTLSDSLVKLQEMVETTVDLDALDRHEYVIKPEFDDSLRIIRKKLDKAK
RDIDQEFNKAAHDLGQEKEKKIFLENHKVHGYCMRLTRTEAGCIRNKSGYQECSTQKNGV
YFTTRNLQNLRREFDQQSQNYNRTQASLVNEVVGVAASYCPVLEKLAAVLAHLDVIISFA
HCSVHAPIEYVRPKMHKRGEGQTVLKEARHPCLEMQDDVQFITNDVELTKDKSSFLIITG
PNMGGKSTYIRQIGVIALMAQVGCFVPCAEAEMTIFDSILARVGASDSQLKGVSTFMAEM
LETANILKSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCSAMFATHFHELTA
LADQHAQVKNLHVTAHISGSEEGDAKREVTLLYKVEDGICDQSFGIHVAELVRFPDKVVR
MAKRKADELEDFTTKHEDLGLKYNKSDVEEGSAMLKDVLVRWKDEVKGGAMSKQDMVKKM
RELVASDEKLLANPFFQSVKLL
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgcgacccgagctgaaggtcgacgatgagcatggcttcattcgatacttcaag
tcacttccagaggttcatgaggacacgatccgaatatttgaccgaggtgattggtacaca
gcacatggtgaagatgccaacttcatcgcgagaacagtctacaaaaccacatcagtcgtt
cgacaactgggacgagatgacaagtccggccttccatctgtaaccatgactgttaccgtt
tttcgacaattcctccgagaagccctctacaagctcagcaaacgcgtggagatttatcag
agcacaagtggccgcatgaactggaaggtcgtcaaacaagcttcgcccggaaacctgcaa
gatgttgaagaagagctcggaggacaattcgaggctgcgcctatgatcctggctgtcaag
attacagccaaggcctccgaggcccgcagcgtcggtgtctgcttcgccgacgccagcgtg
cgagaactgggtgtcagcgaattcctcgacaatgacctctactcaaacttcgaggctctc
ttgattcagctcggtgtccgggagtgtctgattcaggccgacaaggcggagaaggataag
cgagaccccgaactcaccaagctgcgacaaatcatcgacaactgtggtgtagccgtctca
gagcggtcggcagtcgagtttggcaccaaagacatcgaacaggacctcgcccgactgctc
aaggacgaaagggctgtcacacttctgcctcagacagaattgaagctatccatgggatct
gctgccgcactgatcaaatacctgggggttctacatgacccctccaactttggacaatac
cagttgtaccagcacgacttggctcaattcatgaagctcgatgccgcagccctcaaggcc
ttgaaccttatgccagggccccgagacggagcgaaatcgatgagcgtgtacggcctgctc
aaccactgcaagacccccaacggcagccgcttgctgtcacagtggctgaagcagcctctg
atgagcaaacaagacatcgaaaagcgccagcagctggtggaggccttcgccagcgacacc
gagctccgtcaaaccatgcaggaggagcacctgcgttcagtccctgatctttaccgtctt
gcgaagcgtttccaacggaagaaggccaacctggaagatgtcgttcgggcgtaccaggtc
atcattcgcctgcctggcttcctcggcaccttggagggtgtgatggacgaggcgtaccgg
gaccctctggatgaggcatacacctccaagctccgcactctctccgacagccttgtcaag
cttcaggaaatggtcgagaccacggtcgatctggacgcccttgatcgccatgagtacgtc
atcaagcctgaatttgatgacagtctacgcatcatccgcaaaaaacttgacaaggccaag
agagatattgatcaggagttcaacaaggccgcccacgatcttggacaggagaaggagaag
aagatattccttgaaaaccacaaagtccacgggtactgcatgcgactcacgaggaccgaa
gctggttgtatacgcaacaagtcaggctatcaggaatgctcgacacagaagaacggcgtg
tacttcacgaccaggaacctgcagaacctacgccgcgaattcgaccagcagtcgcaaaac
tacaacagaacccaggctagcttggttaacgaggttgttggtgttgcggcctcgtactgc
cctgttctcgagaaacttgctgctgtccttgctcaccttgatgtcatcatctcctttgcc
cactgctcagttcacgcgccgatcgagtacgtccggccgaagatgcacaaacggggcgag
ggccagacagtgctgaaagaggcacgtcacccttgtttggagatgcaggatgatgtgcag
tttatcaccaacgacgtggagctcacgaaggacaagtcctccttcctcatcatcaccgga
cccaacatgggcggaaagtcgacgtacatccgccagattggcgtcatcgccctcatggcg
caggtcggctgcttcgttccctgtgcggaggctgagatgaccatcttcgactccatcctg
gctcgtgtcggtgcgagcgactcccagctcaagggcgtctccaccttcatggccgagatg
ctcgagacggccaacattctcaagtccgcgacggccgagtcccttatcatcatcgatgag
ctcggtcgcggcacgtcgacctatgacggcttcggcctagcctgggccatttcagagcac
attgtcaaggagattggctgctccgccatgttcgcgacgcacttccacgagctcacggcg
ctggccgaccagcatgcccaagtgaagaacctccacgtcacggcgcacattagcggaagc
gaagaaggcgacgccaagcgcgaggtgacgttgctgtacaaggtcgaagacggcatctgc
gaccaaagcttcggcatccacgtcgccgagctcgtgcgcttcccggacaaggtcgtacgc
atggcgaagcgcaaggcggacgagcttgaggactttacgaccaagcacgaagacctcggg
ctcaagtacaacaagagcgacgtcgaagagggcagcgccatgctcaaggatgtgctcgtt
cggtggaaggatgaggtcaagggcggcgcaatgagcaagcaagacatggtcaagaagatg
agagagctggtcgcgtcagacgagaagctgttggcgaatcccttctttcagtcggtcaag
cttctgtag
DBGET
integrated database retrieval system
