Verticillium dahliae: VDAG_02445
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Entry
VDAG_02445 CDS
T03450
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_02445
Enzymes [BR:
vda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VDAG_02445
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VDAG_02445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
20703908
NCBI-ProteinID:
XP_009651393
UniProt:
G2WXW3
LinkDB
All DBs
Position
3
AA seq
550 aa
AA seq
DB search
MPRITTWNVNGIRNPFGYQPWREKRTFEAMFDILEADIVIFQETKIQRKDLKDDMVLIPG
WDVYFSLPKYKKGYSGVVIYTRNATCCPIRAEEGILGVLCPPDSTTRFRDLPEEQQIGGY
PTAEQLSSDIDEATLDSEGRCVILEFPAFVLIGTYSPANRDESRQEFRLGYLSALDARVR
NLVAAGKQVILTGDLNVSRSEIDTINLSEQLRKEDMTMDDWMAIPSRRLFNQLLFEGQVQ
GDRDPGREQPVLWDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDYLLCSAGIKDWFID
SNIQEGLHGSDHCPVYGTLGDTVKVDGQDVHTLDLLNPRGMVEGGKRLREWSPKDLLPMS
AKLIPEFDRRRSIRDMFMKKPAAKVPERKTLLESSDTLGESKREPDSASTPNHETLSARS
DQGVALAEPSGPNNTESKSLPLHSPTKEAAQPQASRPPTKRAAPTTQQSIKASKKSKTND
SQSAAKGNTGSMAQSTLMGFFKPKQAARDVTPAAVSSAEPPSPYQQTAASNDSQRNMVKA
SAGQEGGAEV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaattaccacttggaacgtcaatggcatcaggaacccttttgggtatcagcca
tggagagagaaacggacattcgaggccatgttcgacatactagaggcagacattgtcatc
ttccaggagacgaagattcagcgcaaagacctcaaggacgacatggttctcattcccggc
tgggacgtttacttcagccttcccaaatacaaaaaaggttactccggggtggtaatctac
acgcggaatgcaacgtgctgtcccatacgtgcagaggagggcatcctcggcgttctttgt
cctccagactcaaccaccagattccgcgacttgcccgaagagcaacagattggcggctat
ccaactgctgagcagctttccagcgatatcgatgaagccacactcgattcagaaggccga
tgcgtgatcctcgaatttcctgcattcgtgctcattggcacgtacagtcccgccaaccgc
gatgaatcaagacaagagtttcgcctgggctatctctctgcactggatgcgagggtgcgc
aaccttgttgccgcgggtaagcaggttattttgacaggtgatctgaacgtcagccgatcc
gagattgatacgattaacctctccgagcaattgcggaaagaagacatgacaatggacgac
tggatggccattccctcgcgacggctcttcaatcaacttcttttcgagggtcaagttcaa
ggagatcgcgatcctgggcgcgagcagcctgtcctttgggacatttgtcgctgcttccat
ccagatcgtaaaggcatgtttacgtgttgggacaccaagcggaacacaagaccagccaat
aacggcgcccgcattgattacttgttatgctccgcgggcatcaaagattggttcatcgac
tccaacattcaagaagggctccatggttcggatcattgcccagtctatggtactttgggg
gacacggtgaaggttgacggccaggacgtccatacactcgaccttcttaatccacggggc
atggtcgagggtggaaaacgattgcgggaatggtcgcccaaagacttgctccccatgtct
gctaaactgattcctgaattcgaccgtcgtcgcagcattcgcgacatgttcatgaagaag
ccggccgccaaggtgccagagagaaagacgctccttgaatcctcagacaccctcggagag
tcaaagagagagcccgactctgctagtactcctaaccacgagaccttatcagctcgttcg
gaccaaggtgtggcattggcagaaccctcaggcccaaacaatactgagagcaaatcctta
cccctgcattccccaacaaaggaagcggctcagcctcaagcatcgaggccaccaacaaag
agggcagcacccaccactcagcagtcgataaaagcatccaagaagagcaagactaacgac
agccagtcagctgcaaagggaaatacaggatccatggcgcagagcacgctcatgggcttt
ttcaaacccaagcaggcagccagagatgtgacaccagcggctgttagcagtgccgagcct
ccatcgccctaccaacaaacagcagcctcgaacgacagtcaaagaaacatggtcaaagct
tcagctgggcaagagggtggcgccgaagtgtga
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