Verticillium dahliae: VDAG_02904
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Entry
VDAG_02904 CDS
T03450
Name
(RefSeq) pectate lyase B
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vda
Verticillium dahliae
Pathway
vda00040
Pentose and glucuronate interconversions
vda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
VDAG_02904
Enzymes [BR:
vda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
VDAG_02904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
CBM_1
Motif
Other DBs
NCBI-GeneID:
20704367
NCBI-ProteinID:
XP_009651852
UniProt:
G2WXC5
LinkDB
All DBs
Position
3
AA seq
369 aa
AA seq
DB search
MELKNLALLAFLGLASAQQQPYGQCGGQGHTGPTTCTSVSPKLEQPSPEQPSPEHSAAKH
SSSEYSSSEHTPSQFASSFKRWQLLVGYGAGTTGGGSGSGVTVTSCAALKTAIANAGVIR
ISGILSGCGRMDLLAGTSVIGVGASSGLRDGGFRVRRTGNVIIRNLVFHNPIPGGDIVSL
DQATRVWVDHCDFRSDGIVGDKDYFDGLLDASHASDEITISWNKFHDHWKGSLVGHSDNN
ASEDRGKLRVTYHHNHFYNVNSRLPSIRFGTGHIYSSCYENNPTSGVNSRMGAQVLVENT
VFINTNQAIVTNLDSDEPGFAVQRNNLFTNSPIDITQTGSYSPPYSYTLDPASCVCALVK
ARAGTGVVA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaagaacctggcccttctggcctttttgggtctggcctctgctcaacagcag
ccctatggccaatgcggtggacagggccacaccggcccgacgacttgcacctctgtgtct
cccaagctcgagcagccctcccccgagcagccctcccccgagcactccgccgccaagcac
tcctcctccgagtactcctcctccgagcacaccccctcccagttcgcctcctccttcaag
cggtggcaactcctcgtcggctacggtgctggcaccacgggtggtggcagcggcagcggc
gtgactgtcacttcttgtgcggccctcaagacagccattgctaacgctggcgtcatccgc
atctccggcatcctttcgggctgcggccgcatggaccttctggctggtacgagtgtcatc
ggtgtcggtgcttcctctggtctccgtgacggcggcttccgtgtccgccgcacgggcaac
gtcatcatccgtaaccttgtcttccacaaccccatccctggtggcgacattgtgtctctc
gaccaggcaacccgcgtatgggttgaccactgcgacttccgtagcgatggcatcgttggc
gacaaggactactttgacggcctccttgacgcatcgcacgcctcggatgagatcaccatc
agctggaacaagttccacgaccactggaagggctccctcgtcggtcactccgacaacaac
gcctccgaggaccgcggcaagctgcgcgtcacctaccatcacaaccacttttacaatgtc
aactcccgcctgccctcgatccgcttcggcaccggccacatctacagctcgtgctacgag
aacaaccccacgtccggcgtcaactcgcgcatgggcgcccaggtcctcgtcgagaacacc
gtcttcatcaacacgaaccaggccatcgtcacgaacctcgacagcgacgagcccggcttc
gccgtccagagaaacaacctcttcaccaacagccccattgacattacccaaacgggctct
tactcgcccccttacagctacactcttgacccagcctcgtgcgtctgcgcccttgtcaag
gcccgtgccggcactggtgttgtggcttag
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