Verticillium dahliae: VDAG_02940
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Entry
VDAG_02940 CDS
T03450
Name
(RefSeq) helicase SWR1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
vda
Verticillium dahliae
Pathway
vda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VDAG_02940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_02940
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
VDAG_02940
SWR1 complex
VDAG_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
HDA2-3
DEAD_2
Motif
Other DBs
NCBI-GeneID:
20704403
NCBI-ProteinID:
XP_009651888
UniProt:
G2WXG1
LinkDB
All DBs
Position
3
AA seq
1753 aa
AA seq
DB search
MTRTASPETAHADSAVPGPLRDDQDASAISEAATNNFAITRESSSELSELSDLEPAANGF
LDLAPQPESPTQDDADADDGPPSKRRRLHESTPPPSAARINGKKLESPPWKKAGAEGPTS
FTENGRRKSGRINLALLDSQSPPASRKSRQPRASPVVKKTQVTTNGHATTKQKQAAAARG
TPKNASGRTTSSKASAQPGRTSNRTPSSRISRKRTPSPSSHPTRHSTRTRRPTRGSVDED
ASSPIQESLRSTKYRPRGTIPLVHPLQMSKRPKIGPSFEEYWAKATQIPLQDGGYLAAEE
QYTDTMAEEDARTILRIENAVEPGGILSEGRCTAFVPEPEEEPPRQWAHQDHMVKAATNF
RKLMLAERQRHKTQAKRLAEACRDAWLRRQPKSAEVLEAEARDYWITRYRIVAKVMHGTW
ENVRAEINRRRLQQWEVEEQRRVKAALNEAVSLSEQKLQAQRGQIGSDEDEEDDEDIDEE
DSENDLAATDDENAMGHDSASSMDADDDDSGDDDVMSSSDEDDEPANDSLVDAADETLTQ
DQLRAKYSNIPDLVKEDEDKIANGIRTSPGATTSGDGGSDSTDESIDMDDDMGSSDEGSD
EDDDDDMETGSGSEGDSDAGEPANLLGLFFDKKELQQMQETPEGETEDQSELPSEQDDKK
KALETPIKPRDLPLPAWDSGKKHDVSLALHDDLEDEDDDEPELVTIPPSDPVTGDDTPDV
GDGERPTTNGHVETAVVDEPVTNGIAHSLVATPDATIAPSQDVDMTDAPVLLESLPELAI
TSPQSTQAKPTISGADTIMAPPESGKPTSSPTPDSKQSEADSAALIPASKDDTSRSVSPS
PASAAKTEVPFLLRGTLREYQHFGLDWLAGLYANNTNGILADEMGLGKTIQTIALLAHLA
CHHEVWGPHLVVVPTSVMLNWEMEFKKFLPGFKILSYYGTQEERKRKRHGWNNDDVWNVC
ITSYQLVLQDQQVFKRRKWHYLILDEAHNIKNFKSQRWQTLLGFNTRARLLLTGTPLQNN
LTELWSLLFFLMPSENGVGGFADLQEFHDWFHKPESQILESGRETMDEEARAIISKLHKV
LRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRELYDGFLARADTRDTLASGNYMSIIN
CLMQLRKVCNHPDLFVDRPIMTSFRMQKSVAADYNDTNEFLQRTILAQDAMKLVSLGVVN
LIPTQHEGLSNTVAERISQLSLHRVLLDLREAQNARAHMARTNLDPSTAESNLVYLESLG
RWRRFEELQHCVYLNALRGQRRPIYGKRLVQFLTLNLQQRPRKPRPRVAKNILNWFAEDS
GFLRATIHSMDDRVASMETTIQKFACVTPSVITRDMTEIVLGKRAIDAFTEADLSLSAPV
RWAPFMQKQAPHDPWHEARMRLSIQFPDKRLLQYDCGKLQALDKLLRKLQAGGHRALIFT
QMTKVLNILEQFLNIHGHKYLRLDGATKVEQRQILTDRFNNDPRILCFILSTRSGGLGIN
LTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDVHIYRLVSEHTIEANILRKASQKQML
DDVVIQEGEFTTDYFREKMTVRDAVGEDAELVNDGNAAANAAMDRLLGGGANGSESRNVG
EVLELAEDKEDVAAAKAAEKEIQADDADFQEKTSSVNSGASSTRQGTPRDDPSADAPGTG
PGPSGLGRFSESAAPDASGVPAEVETNAWGERMRTIDDYMLRVMGEQLKGTVLELPKDKK
KGKKKKGKDMRKR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggaccgcgtcgcccgagaccgcgcatgcagactcggccgtccctgggcctcta
cgcgacgaccaagacgcgtcggcgatcagtgaagccgccacgaacaactttgccatcacg
agagaatcctcatccgaactctccgagctctcagacctcgagcccgcagcaaacggcttc
ctcgaccttgccccacaaccagaatcaccaacacaagacgacgccgatgccgacgatggc
cctccatccaagaggcgacgcctccacgagtctacgccgccgccgtccgctgcccgcatc
aacggcaagaaactcgagtctccgccatggaaaaaggccggcgccgagggcccaacctcc
ttcacggagaacggcaggcgcaaatctggccgcatcaaccttgctctcctagattcccaa
tctcctccggcgtcccgcaaatcaagacagccgcgtgcgagcccagtagtcaagaagaca
caagtcacgacaaacggacatgcgacgaccaagcagaagcaggctgccgcggccaggggc
acgcccaagaacgccagcggcaggaccacttcatccaaggcctctgcgcagcctggtaga
acctcaaaccgaaccccctcctctcgaatctcccgaaaacgaacaccctcgccgtcctcc
catcccactaggcactcgacgcgcacgcgaagacctacacgtggctccgtcgacgaagat
gcctcgtctccgattcaggagtcgctacgctccaccaagtatcgaccgcgaggcacgatc
ccactcgtccaccctttgcaaatgagcaagagacccaagatcggaccgagctttgaagaa
tactgggccaaggccacccaaatacccctccaagatggcggctacctcgccgccgaggag
caatacacggataccatggccgaggaggatgcgcggacaatactgcgaatcgaaaatgct
gtggaaccaggaggcatcttgtccgaagggcgatgtaccgccttcgttcccgaacccgaa
gaagagccacctcgtcaatgggcgcaccaggatcacatggtcaaggcagcgaccaacttt
cggaagctcatgttggcggaacgacagcgacacaaaacacaagcgaaaaggctggccgag
gcctgtcgagacgcatggctacgccggcagcccaaatccgcagaagtgctcgaggctgag
gcgagagactactggatcacgcggtaccgtatcgtggccaaggtcatgcacgggacgtgg
gagaacgtgcgagccgagatcaacaggaggaggctacaacaatgggaggtggaagagcag
cggcgtgtcaaggctgctctgaacgaagcagtcagcctgtccgagcagaagctacaggcc
cagcgcggccagatcggtagcgatgaggacgaggaagacgacgaggacatcgacgaggag
gactcggagaacgacttggctgctactgacgacgaaaacgccatgggacatgacagcgca
tcgtcgatggatgccgacgacgacgactctggagacgatgacgtcatgtcttcatctgac
gaagacgatgagccggcgaacgactctctggtggatgctgcagacgaaacccttacgcaa
gatcaactacgggcgaagtactcgaatattcccgacttggtcaaggaagacgaagacaaa
atagctaatgggataaggacaagccccggcgcgaccacgagtggagacggagggagcgac
tcgaccgatgaatcaatcgacatggacgacgacatgggctccagtgatgaaggcagcgac
gaggatgatgatgacgacatggagactgggtcgggttcggaaggggattccgatgcaggg
gaacctgcgaaccttctagggctctttttcgacaagaaagagctgcaacagatgcaagaa
accccggaaggcgagacggaagatcaatcagaactgccgtctgagcaggatgacaagaag
aaagcgctcgaaacaccaatcaagccgcgggacctgccactgcctgcatgggactctggg
aagaagcatgatgtttcgttggccttgcacgacgacctggaagacgaggatgacgatgaa
cctgagctggtcacaatcccaccgtcagacccagtcacaggcgacgatactcctgatgtg
ggcgacggcgagcgaccaactaccaacggccatgttgagactgcagtagtcgacgagcct
gtgaccaacggcattgcacacagtctcgtggctacaccggatgcgacaatagctccatcc
caagacgttgacatgaccgatgcgccggtgcttctggaatctctcccagagcttgccatc
acatctccgcagtctacgcaagctaaacccacaatttctggtgcagatacgatcatggcg
ccgccagagtctgggaagcccacttcgtcacccacacccgactcaaagcagtcagaagcc
gactcggcagcactcatcccggcatccaaggacgacacgagtagatctgtgtcgcccagt
ccagcatcagctgcaaagaccgaagttcccttcctccttcgcggcactcttcgagagtac
caacattttggcttggattggttggcaggtctttatgccaacaacaccaatggtatcctc
gctgacgagatgggcctgggcaagacgatccagacaatcgcgctactggcccatctcgcg
tgtcatcatgaagtctggggcccgcacttggttgtggtgccgacgagtgtcatgctcaac
tgggagatggagttcaagaagttcttgcctggcttcaagattctgtcctactatggcaca
caggaggagcggaagcggaagcgccacggatggaacaatgacgacgtgtggaacgtctgc
atcacttcttaccagcttgtccttcaagaccagcaggtcttcaagcgccgaaagtggcac
tacctcatcctcgacgaggcgcacaacatcaaaaacttcaagtctcagcgatggcagaca
ctgctgggtttcaacacgcgcgcccgactgctgctcacaggcacgccgctgcagaacaac
ctgaccgagttgtggtcgctgctcttcttccttatgccgtcggagaatggtgttggtggt
tttgccgatttgcaggagttccatgattggtttcataagccagagtctcagattctcgag
agcggccgcgaaaccatggacgaggaagcgcgggcgattatttccaagttgcacaaggtt
ttgagaccgtacctgcttcggcgactcaaggccgatgttgagaagcagatgcccgccaag
tacgaacacgtcgagttctgccgcttgtcaaagcggcagagggaactctacgacggcttc
ttggctcgggctgatacccgtgacaccctggcatccggcaactacatgtccattattaat
tgtttgatgcagttgcggaaagtgtgcaatcatccagaccttttcgtcgatcggcccatc
atgacctccttccgaatgcaaaagagcgttgctgccgactacaacgacacgaacgagttt
ctacagcggacaatcctggcgcaggatgccatgaagctcgtcagtctcggcgtggtcaat
ctgatccccacgcaacatgaagggctttccaacaccgttgcagagcgcatctctcagttg
agcttgcatcgagtactgctggacctccgggaagcccaaaatgcgcgcgcgcacatggct
cgtaccaacctcgacccttcaaccgctgagtccaatctggtctatcttgaaagcctcggc
agatggcgacgtttcgaagagctgcaacattgcgtgtacctcaacgccctccgcggacaa
cgccgtccgatatatggcaagcgattagtccagttcctgaccttgaacctgcaacagcgg
cctcgtaagccccgccccagggttgcgaagaacatcctcaactggtttgctgaggactca
ggattcctgcgcgcgacaatccacagcatggacgacagggtagcgtccatggaaacgacg
attcaaaagtttgcgtgcgtgacgccatcggtcatcacgcgagacatgactgaaatcgta
ctcggcaagcgagccatcgacgcgttcaccgaggccgacctcagtctctccgcaccagtg
cgctgggcgccgttcatgcagaaacaggcaccgcacgacccatggcacgaggctaggatg
cggttgagtattcagttccccgacaagcgtctccttcagtacgattgtggcaaacttcag
gcacttgacaagctgcttcgcaagctccaggctggcggccatcgtgcgttgatcttcacg
cagatgaccaaagttctcaacattcttgagcagttccttaacatccacggccacaagtac
ctgcggctcgatggcgctaccaaggtcgagcagcgacagatcctcacggacaggttcaac
aacgacccgcgcatcctctgtttcatcctctcaacccggtcgggcggcctgggcatcaac
ctgaccggcgccgacacggtcattttctacgaccaagactggaaccctgccatggacaag
cagtgtcaggacaggtgtcaccgtatcggccaaacacgcgacgtgcacatttaccggctc
gtcagcgagcacacgatcgaagccaacattctacgcaaggcgtcgcagaagcaaatgctc
gacgacgtcgtcattcaggagggcgaattcacgacagactacttccgcgagaagatgaca
gtgcgcgacgccgtgggcgaggacgccgagcttgtcaacgacggcaacgccgccgccaac
gcggccatggaccgtctcctcggcggcggcgccaacggcagcgagtcgcgcaacgtcggc
gaagtgctcgagcttgctgaagacaaggaggacgtcgccgccgccaaggcggccgagaag
gagattcaggccgacgacgccgactttcaggagaagacgagcagcgtcaactcgggcgca
tcaagtacgaggcagggcacgccccgcgacgacccgtccgcggatgcgccgggcaccggc
cccggcccctcgggtctcggacggttctccgagtcggcggcgcccgatgcatctggcgtg
ccagccgaggtggagacgaacgcgtggggcgagcgcatgcgcaccattgacgattacatg
ctgcgcgtcatgggcgagcagctcaaggggacggtgctcgagctgccgaaggacaagaag
aagggcaagaaaaaaaagggtaaagacatgcgcaagcgatga
DBGET
integrated database retrieval system
