KEGG   Verticillium dahliae: VDAG_03004
Entry
VDAG_03004        CDS       T03450                                 
Name
(RefSeq) hypothetical protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
vda  Verticillium dahliae
Pathway
vda03013  Nucleocytoplasmic transport
vda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDAG_03004
   03015 mRNA surveillance pathway
    VDAG_03004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_03004
   03041 Spliceosome [BR:vda03041]
    VDAG_03004
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     VDAG_03004
Spliceosome [BR:vda03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    VDAG_03004
SSDB
Motif
Pfam: PWI DUF5781
Other DBs
NCBI-GeneID: 20704467
NCBI-ProteinID: XP_009655164
UniProt: G2WZY1
LinkDB
Position
6
AA seq 397 aa
MATGVDARLLKSTKFPPEFNQKVDMQKVNLQVIKKWIASKISEILGGEDDVVIELCFGLI
EGSRFPDIKGLQIQLTGFLDKETAPFCKELWKLFLSAQASPQGVPKELLEAKKLELIQEK
IEADRVAEESRRRREDADRRQSQGGDPRERRDWGRGRGDLDHRDGTASIEAIELKTEDIR
ETVMSRIAIVALASEAAPQVVVAEARDRRLPKVYRPENVAVQVKRAQGTEVNVLLVPVPG
KDLVLHPDRPSLENVQGLLQGKASQAPLAMKKIVGYDLLQEADRGRLLPRDAGRPGLAAA
VAAAAAAAAAAAIPDALQVKAVTVVRDPGVFLVIAEISLPVAARGDQDTVVIDHALYPLP
AQEVIRDNDATDAALRQALRHLDFDCNSLVQPKPDHV
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcgactggagtagacgcaaggctcttgaagtctacgaagtttccgccagaattcaat
cagaaggtggacatgcaaaaagtcaacttgcaggtcatcaagaagtggatagccagcaaa
atctccgagattctcggaggcgaagacgatgtcgtgattgagctctgctttgggttgata
gagggttcccgattcccggacatcaaaggtctccaaattcaattgacgggattcctcgac
aaggaaaccgcgcctttctgcaaagagctctggaagctcttcctcagtgctcaggccagt
ccccagggtgtgcccaaggagctgctcgaagccaaaaagcttgaactcattcaggagaag
attgaagcagacagagttgccgaggagtcccgtcgccgtcgcgaagatgcggatcggcga
caatcacaaggaggagacccgagagaacgccgcgactggggacgagggcgaggagatctc
gatcaccgggatggaaccgcgagcatagaggccatcgagttgaaaaccgaggatatcaga
gagacagttatgtcccgaatagccatcgtggcactggcatccgaggcggcgccgcaggtc
gtcgtcgcagaagcacgcgatcgccgtctgccgaaggtttatcgccccgagaacgtcgca
gtccaagtcaagagggcccaaggcaccgaggtcaacgttctcctagtcccggtccccggc
aaagatctggttctccatccagacaggccaagcctcgaaaacgttcaaggtcttctacaa
ggcaaagcaagccaagctccgctcgcgatgaagaagattgtcggttacgatctgcttcaa
gaagccgatcgcgggcgcctcctgccaagagacgcaggccgtcccggtctcgcagccgca
gtcgcagccgcagccgcagccgcagccgcagccgcaatcccagacgcccttcaagtcaaa
gccgtaacagtcgtgcgcgatccaggagtttttctcgtcatcgccgagatctctctccca
gtagcggcaaggggcgaccaagacaccgtcgtgatcgatcacgctctctatcctcttccc
gctcaagaagtcattcgagacaacgacgccacagacgccgcacttcgtcaagctcttcgt
catctagacttcgactgcaacagcctggtgcaaccaaaacccgaccacgtctag

DBGET integrated database retrieval system