Verticillium dahliae: VDAG_03004
Help
Entry
VDAG_03004 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
vda
Verticillium dahliae
Pathway
vda03013
Nucleocytoplasmic transport
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDAG_03004
03015 mRNA surveillance pathway
VDAG_03004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_03004
03041 Spliceosome [BR:
vda03041
]
VDAG_03004
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
VDAG_03004
Spliceosome [BR:
vda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
VDAG_03004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
DUF5781
Motif
Other DBs
NCBI-GeneID:
20704467
NCBI-ProteinID:
XP_009655164
UniProt:
G2WZY1
LinkDB
All DBs
Position
6
AA seq
397 aa
AA seq
DB search
MATGVDARLLKSTKFPPEFNQKVDMQKVNLQVIKKWIASKISEILGGEDDVVIELCFGLI
EGSRFPDIKGLQIQLTGFLDKETAPFCKELWKLFLSAQASPQGVPKELLEAKKLELIQEK
IEADRVAEESRRRREDADRRQSQGGDPRERRDWGRGRGDLDHRDGTASIEAIELKTEDIR
ETVMSRIAIVALASEAAPQVVVAEARDRRLPKVYRPENVAVQVKRAQGTEVNVLLVPVPG
KDLVLHPDRPSLENVQGLLQGKASQAPLAMKKIVGYDLLQEADRGRLLPRDAGRPGLAAA
VAAAAAAAAAAAIPDALQVKAVTVVRDPGVFLVIAEISLPVAARGDQDTVVIDHALYPLP
AQEVIRDNDATDAALRQALRHLDFDCNSLVQPKPDHV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgactggagtagacgcaaggctcttgaagtctacgaagtttccgccagaattcaat
cagaaggtggacatgcaaaaagtcaacttgcaggtcatcaagaagtggatagccagcaaa
atctccgagattctcggaggcgaagacgatgtcgtgattgagctctgctttgggttgata
gagggttcccgattcccggacatcaaaggtctccaaattcaattgacgggattcctcgac
aaggaaaccgcgcctttctgcaaagagctctggaagctcttcctcagtgctcaggccagt
ccccagggtgtgcccaaggagctgctcgaagccaaaaagcttgaactcattcaggagaag
attgaagcagacagagttgccgaggagtcccgtcgccgtcgcgaagatgcggatcggcga
caatcacaaggaggagacccgagagaacgccgcgactggggacgagggcgaggagatctc
gatcaccgggatggaaccgcgagcatagaggccatcgagttgaaaaccgaggatatcaga
gagacagttatgtcccgaatagccatcgtggcactggcatccgaggcggcgccgcaggtc
gtcgtcgcagaagcacgcgatcgccgtctgccgaaggtttatcgccccgagaacgtcgca
gtccaagtcaagagggcccaaggcaccgaggtcaacgttctcctagtcccggtccccggc
aaagatctggttctccatccagacaggccaagcctcgaaaacgttcaaggtcttctacaa
ggcaaagcaagccaagctccgctcgcgatgaagaagattgtcggttacgatctgcttcaa
gaagccgatcgcgggcgcctcctgccaagagacgcaggccgtcccggtctcgcagccgca
gtcgcagccgcagccgcagccgcagccgcagccgcaatcccagacgcccttcaagtcaaa
gccgtaacagtcgtgcgcgatccaggagtttttctcgtcatcgccgagatctctctccca
gtagcggcaaggggcgaccaagacaccgtcgtgatcgatcacgctctctatcctcttccc
gctcaagaagtcattcgagacaacgacgccacagacgccgcacttcgtcaagctcttcgt
catctagacttcgactgcaacagcctggtgcaaccaaaacccgaccacgtctag
DBGET
integrated database retrieval system