Verticillium dahliae: VDAG_03014
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Entry
VDAG_03014 CDS
T03450
Name
(RefSeq) transcription initiation factor iif
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_03014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_03014
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
VDAG_03014
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
DUF3591
Motif
Other DBs
NCBI-GeneID:
20704477
NCBI-ProteinID:
XP_009655174
UniProt:
G2WZZ1
LinkDB
All DBs
Position
6
AA seq
368 aa
AA seq
DB search
MADPVPVKSEPYIKPDPDAVASPSATPLEDDDLYEDAGDLEFYDASGASGTFSQAYLAKV
PKEIWDAWSNLPEDAEIEVGTMRQWDVIRPDGGVDHRFRMLLNSELAGHQLMPREYDLEM
GSELTRGTFVFSEEDLPGFKAKSKARNDAANNGIPAHLLRPKVDRPARKPFDRKARYQPF
YRKAIPKKTKIRARIQYEMGCKPVDNEESRAILQLKQMEAHKPKHTLKIVDHYQISGVIQ
QGSAAAQAKFGSFVKTTNPVKTSKQKKPANKATRMDETELREALLDAFTNRFQYWKMSVL
KATFNQPEAYLRQELEKIAVMNRSGPHSNEWEIKPEFKLIQNQALDQSAPDAVADDDDDM
DMEDVVLA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccgtgccggtgaaaagcgagccatatatcaagccagatcctgatgccgtt
gcatccccgtctgcaacaccgcttgaggatgacgacctctacgaagatgccggtgatcta
gagttctatgatgcaagtggtgcttctggcacgttcagccaggcctacctagccaaagtt
cctaaagagatctgggacgcgtggagtaatcttcctgaggacgcggaaatcgaggttggc
accatgagacaatgggacgtcatccgcccagatggaggagtcgatcatcgcttcaggatg
ctcctgaattctgagttggcagggcaccagcttatgcccagggagtatgacttggagatg
ggatcagagctcacgcggggaacctttgttttctccgaggaggacctccccggcttcaaa
gcgaagtcaaaagcgagaaacgacgcggcgaacaacggaataccagcacacctgctacga
ccgaaagttgacaggcctgcacggaagcccttcgacagaaaggctcgctatcagcctttc
tatcggaaggctataccaaaaaaaacaaagatcagggcccgtatccagtacgagatgggc
tgcaaaccagtagacaacgaggagagcagggcaattctgcaactcaaacagatggaggca
cacaagccaaagcatactctgaagatcgtggatcattaccagatcagcggggtgattcag
cagggctccgccgctgcccaggctaaattcggctctttcgttaaaactacgaatccggtc
aagacgagcaaacaaaagaagccagccaacaaagccactcgtatggacgagacagaattg
cgagaggctcttctcgatgcctttaccaacagattccagtactggaaaatgtctgttctc
aaggcaaccttcaaccagccagaagcgtatcttcgtcaagaactagagaaaatcgcagtg
atgaataggtcagggcctcattccaatgagtgggagatcaaacccgagttcaaactcatt
caaaaccaagcactggatcaaagtgcgccggacgcagtggcagacgacgacgacgatatg
gacatggaggacgtggtgcttgcgtga
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integrated database retrieval system
