Verticillium dahliae: VDAG_03020
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Entry
VDAG_03020 CDS
T03450
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_03020
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
VDAG_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Sigma70_ner
IBN_N
CC4_CEP85
Motif
Other DBs
NCBI-GeneID:
20704483
NCBI-ProteinID:
XP_009655180
UniProt:
G2WZZ7
LinkDB
All DBs
Position
6
AA seq
693 aa
AA seq
DB search
MRPFTSIVRQRAGAPSTLATPTKGILRPPSILGRRKSEHAGLDSDLADPPSSPTKRRKVF
IDELNNKVIEFGDRSLDEVNMEVRKALEEHLMGEDSDYDNLKEIFANDKRKSPSDLGSDS
VVKPQELKLYILALTNCVPLLKNRACNGLVRNFLQVSWLGRDENFYKVYLQLMAALVSAQ
GSYLSIVLSTMMEKFSHSSSADWSIPEYPSVTREAMRERLHGALRYLLKMFPAATPVLRT
LISAKFPFADDPQRAHVAYVKNLLALKEYVTELDLDIVDLILQRLVAIDVQMQVDLEDLD
DELTASVAYALGKSSNPGSWEGDEMDPGEDKDDDDDDDESVDSDDSDVDDQEAKARTVKS
NVEKLDAILDTLFEYYTPHFADPDSDDAYYEYALLVQSFGKFVLPTYKSRHTQFLLFHFG
QLSERLRDTFVGSLMHIFTEQNRPAFVRQAAATYLAGFVARGAHVPGDLVRTIFNLLLAR
MKSYRLRHDAQSRGPDMKRHQIYYSMAQAILYVYCFRWKDLVVSVPEHVDPEDASSYLGH
ELEWIHGLKEELASHVYCRMNPLKICSPAIVDEFATLAHKLGLMYIFPRLAENQRLRLSQ
FVSDTYGNGGALRDTGGAQGEEAHQLDPYFPFDPYQLPVSKRWVHGDYVQYEAVPGLNMT
AENDSSDEDDEDDEPDTDVDEDTATASENEDED
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctttcacctccatcgtgaggcaacgtgccggcgctccctccacattagcgacc
cctacgaagggtatccttcgaccaccctctattctcgggcgccgaaagagcgaacacgct
ggtctcgattccgacctggccgacccaccatcgagtcccacgaaacgacgcaaggtattc
atcgacgagctgaataacaaggtgattgagttcggtgatagatctctcgacgaagtcaac
atggaggtccgaaaagctttggaagaacatctcatgggcgaggatagcgactatgacaac
ctgaaggagattttcgccaacgacaagcgcaagtcgccgtccgacttggggagtgacagc
gtcgtgaagccgcaagagctcaagctatacatcttagctttgacgaattgtgtgccactt
ctcaagaaccgagcttgtaacggactcgtgcgcaattttctccaagtgtcatggctcggt
cgtgatgagaacttttataaggtctacctccagctcatggcggcattggtcagcgctcag
ggctcctacctatcgattgttctgtccaccatgatggaaaagttctcacactccagttca
gccgactggagcatacccgagtacccttcagtaacaagagaagccatgcgcgagagattg
cacggcgccttgcggtatcttctcaagatgttcccggctgcaacaccagttctacgaaca
ctgatcagtgccaaattcccttttgccgacgatcctcaacgagcccacgtcgcatacgtt
aagaatcttctggcgctcaaggaatacgtaacggaactcgatttggatatcgttgatctt
atcctgcaacggctggtggctatcgatgttcagatgcaagtcgaccttgaagatttagac
gacgaactgacggcgtcagtcgcatacgctctgggcaagtcgtcaaatcctgggtcttgg
gagggtgatgagatggacccgggcgaagacaaggacgacgatgacgacgacgacgagtct
gtcgatagtgacgattcagatgttgatgatcaagaggccaaggcacgaaccgtcaagagc
aatgttgagaaactggatgccatcctcgacaccctctttgagtattacaccccgcacttt
gccgaccctgactcagacgacgcttattacgaatatgctctactggtccagtcattcggc
aagtttgtgttgccgacgtacaagtcgagacatacgcaatttttgctcttccactttggg
cagctctcagaaagactacgcgacacattcgtgggatccttgatgcacatcttcaccgaa
cagaaccgaccagctttcgtacgacaggccgcagccacatatctagctggttttgtggca
aggggagctcacgtaccaggagacttggttcggaccatcttcaatctcttactggcacga
atgaagtcgtacaggctgaggcacgatgcacagtcacgagggcccgatatgaagcgacat
caaatatactactcgatggcacaggccatattgtacgtatactgcttccgttggaaggat
ctggtcgtttcagtaccagaacacgtcgatccggaagatgcatcgtcgtatctgggccac
gaacttgagtggatccacggcctcaaggaagagcttgcgagccacgtatactgcaggatg
aaccctctcaagatctgctcgcctgctatagtggacgagtttgccaccctcgcacacaag
ctgggactgatgtacatattcccccgtctcgcggagaaccaacgcctccggctctcgcag
tttgtttctgatacgtacggcaacggaggtgcgttgcgagacacgggcggtgcgcaaggg
gaagaggcccaccaactggatccatacttccctttcgatccctaccaactgcccgtcagt
aaacgttgggtccatggcgattacgtgcagtacgaggcagtgccggggctcaacatgacg
gcggagaacgacagcagcgatgaagacgacgaggatgacgagccggatacggatgttgac
gaagatacggcgacagccagtgaaaacgaagacgaggactga
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