KEGG   Verticillium dahliae: VDAG_03063
Entry
VDAG_03063        CDS       T03450                                 
Name
(RefSeq) splicing factor U2AF 50 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
vda  Verticillium dahliae
Pathway
vda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDAG_03063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vda03041]
    VDAG_03063
Spliceosome [BR:vda03041]
 Complex A
  U2 snRNP components
   U2 related factors
    VDAG_03063
 Complex B
    VDAG_03063
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 20704526
NCBI-ProteinID: XP_009655223
UniProt: G2X040
LinkDB
Position
6
AA seq 589 aa
MNGDGYSRDERRGGGGGGGRDYQRGHREDRRDRERGGERGGDRGQERGHRDRRRSRSPYE
RGSRRQENDDSYAASRSHREREREDRYSGRDRRAERDWDRDRGSSRRDARRDDDDRGVRR
GGDRDQFDDRRRGGRDRNDEFARREQRPRSASPPPKKREPTPDLTDIVSVLDRKRRLTQW
DIKPPGYENVTAEQAKLSGMFPLPGAPRQQPMDPTKLQAFMNQPGTVNSASLKPSNSRQA
KRLLVSKLPSSATEDSVASFFNLQLNGLNVIESTDPCVSCQLSNDKSFCVVEFRNASEAT
VALALDGISMEADSATDGAAGRGLEIRRPKDYIVPAVTEELPYEPGVVSSNVVDTPNKLS
ITGFPPYLTEEQVTELLTSFGELKAFVLVRDRHTDESRGFVFCEYVDSAANDVAIQGLSG
MDLGNSKLKIQKASIGVTQVAGVEMGVAAMSMLAGTTATDSEESRVLQLLNMVTADELMD
NEDYEEIVEDVQEECAKYGTVLEVKVPRPVGGSRQSAGVGKIFVKYETKEATKKALQSLA
GRKFADRTVVTTYFPEIVPLQTGLTGNGKEHEVCHKKGPESTHGKLRDF
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaacggcgacggctactctcgagacgagcgacgaggcggaggtggaggtggaggtcgc
gactaccagcgcggacatcgcgaggaccggcgcgatcgagaacgcggcggagagcgcggc
ggcgaccgcggccaggagcgcggccaccgagaccgtcgccgatcccgctcgccctacgaa
cgaggctcgagacgccaggagaacgacgatagctacgccgccagccggagccacagggaa
cgcgagcgcgaggacagatactctggaagagacaggcgcgccgaacgggattgggaccgt
gatcgcggttcgtcccggcgcgatgccaggagagatgacgatgatcgcggcgtgcggagg
ggaggcgacagagaccagttcgacgaccgcaggcgtggtggccgcgacagaaatgatgaa
ttcgcccggcgtgagcagcgtccccggagcgctagcccgccccccaaaaagcgcgagccg
acccctgatctaaccgacatcgtctcggtgctggaccgcaagcgccgcctcacccagtgg
gatatcaagccccctggctatgagaacgtcacggccgaacaggcgaagctgtccggcatg
ttccctctgcccggtgccccgcgtcaacaacctatggaccctaccaagctccaagctttc
atgaaccagcccggcaccgttaacagcgcgtccctgaagcctagcaactctcgccaggcg
aagcggctgctcgtcagcaagcttccctcctcggcgaccgaggatagcgtggccagcttc
ttcaacctgcagctcaatggcttgaatgtcattgagagcaccgacccttgcgtgtcctgt
cagctgtcaaacgacaagtccttctgcgtggttgagttccgcaacgcctccgaggcaacc
gtggctttggcattggatggcatctcgatggaggccgattctgctaccgacggcgctgcc
gggcgcggattggagattcgcaggcccaaggattacatcgtccctgccgtcacggaggag
ctgccttacgagcctggtgttgtttccagcaatgttgtcgacacgccgaacaagctcagc
atcactggcttcccgccttacctgacggaagagcaggttacagaactcctgacatcattc
ggagagctcaaggctttcgtgcttgttcgcgatagacacacagatgagtctcggggcttt
gtgttctgcgagtatgtcgatagcgctgccaatgatgttgctatccagggcttgtccgga
atggacctcggaaacagcaagctcaagatccagaaggccagcattggcgtcacgcaggtt
gcaggcgttgagatgggtgtggccgccatgtccatgctggccggcaccacggcgaccgac
tccgaagaaagccgggtattgcagcttctcaacatggtcacggccgacgagctgatggac
aatgaggactatgaggaaatcgtggaggatgtgcaggaggagtgcgccaaatatggcacc
gtcctggaggtcaaggtaccccgccctgttggcggcagcaggcaatcagccggagttggc
aagattttcgtcaagtacgagaccaaggaggcgacgaagaaggccctccagtctttggcg
ggcaggaagtttgcggacaggactgtcgtcacgacatatttcccagagatagtgcccctg
caaactggtttaacgggcaatggaaaggaacacgaagtgtgtcacaaaaagggtccagag
tcgacccacgggaaattaagagacttttaa

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