Verticillium dahliae: VDAG_03113
Help
Entry
VDAG_03113 CDS
T03450
Name
(RefSeq) peroxisomal biogenesis factor 6
KO
K13339
peroxin-6
Organism
vda
Verticillium dahliae
Pathway
vda04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VDAG_03113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vda04131
]
VDAG_03113
Membrane trafficking [BR:
vda04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
VDAG_03113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX6_4th
PEX6_N
Parvo_NS1
RuvB_N
AAA_16
nSTAND3
AAA_28
AAA_2
TIP49
AAA_25
AAA_5
RNA_helicase
Mg_chelatase
AAA_14
AAA_lid_3
AAA_22
AAA_17
IstB_IS21
ATPase
CecR_C
AAA_7
TsaE
PhoH
DUF815
Motif
Other DBs
NCBI-GeneID:
20704576
NCBI-ProteinID:
XP_009655273
UniProt:
G2WYM1
LinkDB
All DBs
Position
6
AA seq
1369 aa
AA seq
DB search
MASAILAKRRRRRRRADKPAAAATLLLDGNVKGDVGFLSDDLFADLFPQLSNSIAPWAPT
ASPTKTSWTLVPVLKNPELGPLYPAVFPEVPGPAVLPHGSAAPGPLQAHGQRPAVALRFS
SSMPLPCRSTPSLSNLEKESIKASGNRARAISSTATPTTTPRPRPKGKTATSPEDHLTEA
LRVALGSVAVIHSGDQFLLPLPPHPVTHVPPNGGEIVMCEPYNQGILTPDTKIVLMRGNV
RAKSGRTPAAMAANRGLNGVPEDDEDTANDQFYSAAEERYKTDAQVTEMETVTETEESEA
SGLEQDDESSDDSMDDMISLQAPMLHTTNASGVSTMQPGSPMTIGRGRRTNGIATPGSVF
SSYTATTARPDRPRGRLFKAQGLMEQIPQVLLHPKPTPEDDEEARIFVDISSLLKIGCFS
GDWVRVEAAEEPPAHGFGAFGLGGLNSLNALEDGPEPNWRPVRVYSLPEGYTQKPVTRIP
SSRHLQRKPSFFESQTQKPTGPAAYISPILLANLESPAYLRLSPLKPSTPQGKRTAAKFS
RASHPPFARDITIHQVRSPISVERAYQTVVLAGLKRYFAEKVRIAKAGDLIAVPIDTLLG
KMFQDAEVDNIISLSNDTSKANQVAWFKVGHVQAQKRDEDDDLIEDLWKGVACIDSETVG
MNLSGFVTARPPASLSSTWEYYTGVKKAPIRSLAAPTPALPSQDQRYISPLRHRLQALLA
AATSPAAIHGRMSPVAILLTSTHRYIGKSTVATAACADVGLHTYPIDANDLLSEAEGSGS
DVKTEGFLKARAERGLSCGADCTVLLFKHIEGLTADRMVSTMKGLLQESRVLIATTNDVD
KLPKGLRSLFTYELEMGAPDEVERAGILRSVVDDMGLDLDLDVEISGVALKTAAFVAGGL
VDAVERARIARNLRLEDMSRKASSDNRIVTVRDVEVSGGPQATGCPAARSVTKTDFDVAV
EKARKNFAGAIGAPKIPNVTWDDVGGLQYVKDAVKETIQLPLERPELFAKGLKKRSGILF
YGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQKARDARPCVVFF
DELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGSDGGGGVFVIGATNRPDLLDPAL
LRPGRFDKMLYLSVADTRETQLKILEAVTRKFTLHPSLSLDRVASQLPYHYTGADYYALC
SDAMLKAITRQTSSVDAKVAAINAARGPDQHPISTANFFDHHATAEDIAVVVTEEDFLAA
DRELVPSVSAGELARYETMRRSFEGPAQKEGQEAEVARPGGGAARAVSGESVASSKGKGK
APARDKGKGKALAVDSDDDDDRAPNGRVNKGKGKAAFQHGTADDDDELY
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccatcctcgccaaacgcaggcgtcgccgtcgaagggccgacaagccagct
gccgccgcgaccctcctcctcgacggcaatgtcaagggcgatgtcggcttcctgtccgac
gacctctttgctgatctgtttcctcaactttccaactccatcgcgccctgggctcccact
gcctctccgaccaaaacatcatggaccctcgtgcccgtcctcaagaaccccgagctgggg
cccctctatcctgcagttttccccgaggtccctggccctgcagtccttccgcacggctct
gcagcacctggccccctccaagctcatgggcaacgccccgcggtggcattgagattctcg
tcctcgatgccgttgccctgccgctcgacaccgtctttgtcaaatctcgagaaggaatcc
atcaaagcgtctgggaacagggcgagggccatttcttcaacagccaccccgaccacgaca
ccaaggccaaggccaaagggcaagaccgccacctcccccgaggatcacctcaccgaggcc
ctgcgcgtcgcgctgggcagcgtggctgtcatacactctggcgaccagtttcttctgcct
ctgccgcctcatcccgtcacccatgtgccgcccaatggcggcgagatcgtcatgtgcgag
ccctataaccagggcatcctgacgcccgacaccaaaatcgtgctgatgcgcggcaacgtg
cgcgccaagtctgggcgtacgccggctgccatggccgcgaaccgtgggctcaacggcgtg
cccgaggacgacgaggacaccgccaacgaccagttctactcggccgccgaggagcgctac
aagacggacgcccaggtcacagagatggagacggtcacagaaacagaagagtctgaggcc
tcggggctcgagcaggatgacgagagttctgacgactccatggacgacatgatctctctt
caggcgcccatgctgcacacaacaaacgctagtggcgtctccacgatgcaaccaggctcg
cccatgaccattggcagggggaggcggaccaacggcattgcgacacccggctcagtcttt
tcgtcttacactgcgacgaccgcgcgaccggaccgccctcgaggccgtctcttcaaggcg
cagggcctcatggagcagatacctcaggtcctcctccacccgaagccgacgccagaagac
gatgaggaggcgaggatatttgtcgacatttcttctttgctgaaaattggctgcttttcg
ggagactgggtccgtgtggaggcggctgaggaacctcccgcccacgggttcggcgccttt
ggtctcggtggcctcaacagcctgaacgccctcgaggacggcccggagccaaactggcgg
cctgtcagggtgtacagtcttcccgagggatacacgcaaaaacccgtcacgaggataccg
agctcgaggcacctgcagcgcaagccgtcctttttcgagtcacaaacgcagaagcccacc
ggccccgcggcatacatctcccccatcctcctcgcaaatctcgaatcgccagcctacctt
cgtctctcgcccctgaaacccagcacgccgcaaggcaagaggactgctgccaagttctcg
agggcatctcacccaccctttgcgcgagacatcaccatccatcaagtcaggtcccccatt
tccgtcgagagggcgtaccagaccgtcgtcctggctggtctcaagcgttactttgccgaa
aaggtccgaattgccaaggcaggtgacttgattgctgttcctatcgatactcttctcgga
aagatgtttcaagatgccgaggtcgacaacatcatatccttatccaacgacacgtccaag
gccaaccaggtggcgtggttcaaggttggacatgtccaagcgcaaaagcgtgatgaagac
gacgacctcattgaggatctgtggaagggcgtggcctgcatagacagcgagacggtcggt
atgaacctgtcaggctttgtcacggcccgcccccccgccagcttgtctagcacctgggaa
tactacactggcgttaaaaaggctcccatccgatcactggccgcgcccacaccggccctc
ccttcgcaagaccaacgctacatctcgcccctgagacacaggctgcaggcccttctggcg
gcggcgaccagtcccgcggccattcacggccgcatgtcaccggttgccatccttctcacc
tcgacgcatcgctacattggcaagtcgaccgtagccaccgctgcgtgcgccgatgtcgga
cttcacacatatcccattgacgcgaacgacctgctgagcgaggcagaagggagcggcagc
gacgtcaagacggaaggtttcctcaaggctcgagcggagcgtggcctcagttgtggcgcc
gactgcacggtgttgctattcaagcacattgagggcctgacggcagaccgcatggtgtcg
acgatgaaaggactactccaggagtcgagggtcttgattgcgacgacaaatgatgtcgac
aagctgcccaagggcctgcgcagcctcttcacatacgaacttgagatgggtgctcctgac
gaggtagagcgagcaggcatcttgaggagcgtcgttgacgatatggggctcgaccttgat
ctcgatgttgaaatcagtggcgttgccctgaagacggctgccttcgtagcaggcggattg
gtggacgcggtggagcgggctcgcatcgcccgcaacctgcggttggaggacatgtcgcga
aaggcctcgagcgacaaccgaattgtgaccgtcagagacgtcgaggtctcgggcggacca
caagccaccggatgccctgcagcacgcagcgtgaccaagaccgattttgacgttgccgtg
gagaaggcccgcaagaactttgctggtgccattggcgcacccaagatccccaacgtcacc
tgggacgacgtgggtggcctgcaatacgtcaaggacgctgtcaaggagaccatccagctg
cccctcgagaggccggagctgttcgccaaggggctgaagaagcgctccggcattttgttc
tacggccctcccggaacgggcaagacgctcctcgccaaggccatcgccaccgagtacagc
ctcaactttttcagcgtcaaaggccccgagctgctcaacatgtacattggtgagtcggag
gccaacgtgcgccgcgtcttccaaaaggcgagagacgcgcgcccttgcgttgtcttcttc
gacgagctcgactcggtcgcgcccaagcgtggcaaccagggagacagcggcggcgtcatg
gaccgcatcgtgtcgcagctcctcgctgagctcgacggtatgtcgggcggcagcgatggc
ggcggcggcgtcttcgtcattggtgcgaccaacaggcctgacttgcttgatccggcactg
ctgcggccgggccgcttcgacaagatgctgtaccttagtgtggccgacacgcgcgagacg
cagctcaagatccttgaggctgtcacccgcaagttcacccttcacccctcactctcgctc
gaccgcgtcgcctcccagttgccctaccactacacgggtgcagactactacgctctctgc
agcgacgccatgctcaaggccatcacgcgccagacgtcgtccgtcgacgccaaggtggcg
gccatcaacgcagcacgcggcccagaccagcatcctatctcaacggccaactttttcgat
catcacgccacggcagaggatattgctgtcgtcgtgacggaagaggacttcctcgccgcc
gaccgggagctcgtgccgtccgtcagcgcaggcgagctggcgcggtatgagacgatgagg
cgttcgttcgagggcccggcgcagaaggaagggcaggaggccgaagtcgcgagaccaggc
ggcggcgctgcgagggctgtatccggcgagtcggttgccagttccaaagggaagggcaag
gcgccagcgcgggataagggcaaggggaaagcgctggcggtggacagcgacgatgacgac
gatcgggcccccaacggccgcgtcaataagggcaagggcaaagctgcttttcagcacggg
acggcggacgatgatgacgagctgtactga
DBGET
integrated database retrieval system
