Verticillium dahliae: VDAG_03294
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Entry
VDAG_03294 CDS
T03450
Name
(RefSeq) RNA exonuclease
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
vda
Verticillium dahliae
Pathway
vda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDAG_03294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vda03009
]
VDAG_03294
Ribosome biogenesis [BR:
vda03009
]
Eukaryotic type
Pre-60S particles
RNases
VDAG_03294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
20704757
NCBI-ProteinID:
XP_009655454
UniProt:
G2WZ52
LinkDB
All DBs
Position
6
AA seq
729 aa
AA seq
DB search
MGKNRKQKAERLQLEAQAAAQAATAALSPGGIADSIAQLQAAAAAAEAEAEASSKLQGTT
LARESSGSDQSASSGASLKRAAPHDDNDGDQDGGGWQKVERSNKKLKKVPKEGSSSYPSI
AFASSAKLFSKINVSQLRDLCLYIFADGPAPTWIAVQHRPQFRKVVVLMIPGLEEAMFTG
KVDFGTYNSASTKDEERTITTPDDFYPRLLKSDYLPPVLQPWLDMFPHLWPVRAPGDDKH
MKLHSPMGTFLTAPLAKTKDKGVKPAKEPNGWKNERTRITEFLASVDELEANGHLIHPAL
IDDEARRAAFKAPDGWVVTRVDKLEDADVPEAEVEQGSVTAGRECLALDCEMCMTGESEY
SLTRISVISWSGEVVMDELVKPDKPITNYVTQFSGITEAMLAPVTTTLRDIQNKLLDLIT
PRTILIGHSLESDLKALHLSHPFIVDTSLIFPHPRGPPLKSSLKWLTQKYLNREIQRGGA
NGHNPVEDARACLDLTRQKCEKGKLWGSSDAQGENLFRRLARAGTSYKAQGGDAAQGGVV
SGKTSAAVDWGDPSKGPGAGATHQIGCRSDEEVTEGVIRAVQGDPDGAEIRGGGVDFVWA
RMRELEAHQGWWNRNRGENGGTGPPDVEPEAAPGDGRPPLERCLARLTERLGRIHAALPK
CTAFMIYSGSGDPREMARMQAVHAQWRKEYNTPGKKWDQLSVKWTDAEDQALKKAVRRAR
EGLGFISVK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaacagaaagcaaaaggctgagcgtctccagctcgaggcacaagctgccgct
caagctgcgacagcagctctgagccctggcggtatcgcggacagcatcgcccagctccaa
gcagccgccgccgccgccgaggctgaggctgaagccagcagcaagttgcaaggaaccact
ttggcccgcgagagctctggctctgatcagagcgcgagtagtggtgccagcctcaaacgc
gccgcgccccacgacgacaacgatggggaccaagacggcggtggatggcaaaaggtggaa
aggtccaacaagaaactgaagaaggtgcccaaggaaggctcttcttcctacccttcgatc
gctttcgcctcgtcggccaagctgttttctaagatcaacgtctcccagctacgcgacctc
tgcctctacatcttcgccgacggccctgcgccaacatggattgccgtccaacaccgaccc
cagttccgcaaggttgtcgtcctcatgatacccggcctcgaagaagccatgttcaccggc
aaggtggactttggcacatacaactcggcttccaccaaggacgaggagcggacaatcacg
acacccgacgacttttacccccgcctgctcaagtccgactacctcccccccgtcctgcag
ccgtggctcgacatgttcccccacctgtggcctgtgagggcgcccggcgacgataagcat
atgaagctgcactctcccatgggcaccttcctgacggcgccccttgccaagaccaaggac
aagggcgtcaagcccgccaaggagcccaacggctggaagaacgaacgaacgcgcatcacc
gaattcttggcctcggttgatgagctcgaggccaacggccatcttattcatccggccctg
atcgacgatgaggccagacgcgccgcgttcaaggcacccgacggatgggtcgtcacgaga
gtcgacaagctcgaagatgctgacgtgcccgaggcagaggtcgaacagggcagcgtcaca
gccggccgagaatgcttggctctggactgcgaaatgtgcatgacgggcgagagcgagtac
tccctcaccaggatcagcgtcatctcctggtctggcgaggtcgttatggacgagctcgtc
aagcccgacaaacccattaccaactacgtcacccagttctctggcatcaccgaagccatg
cttgcgccagtcaccacgacactgcgcgacattcagaacaagctcctcgacctcattaca
ccgcgcaccattctcatcggacactcactcgagtctgacctcaaggctctccacctctct
cacccattcatcgtcgacacgtccctcatcttcccccaccctcgcggcccgcctctcaag
tcttccttgaagtggctcacacagaagtacctcaaccgtgagatccagcgcggcggagcc
aacggccacaaccctgtggaggatgctcgcgcctgtctcgacctgactcgccaaaagtgt
gaaaagggcaagctctggggcagctccgatgcgcaaggcgagaatctcttccgccgtctc
gcacgggcaggtacatcctacaaggcacagggcggtgatgcagcacagggtggtgtcgtc
agcggcaagacaagcgccgccgttgactggggcgatccgtccaagggtcccggcgccggc
gctactcaccagatcggctgccgttccgacgaggaggtcactgagggcgtcatccgtgcc
gtccagggcgaccccgacggtgccgagattcgtggcggcggcgtcgactttgtctgggca
cgaatgcgcgagctcgaggcgcaccaggggtggtggaatcgcaaccgcggcgagaatggc
ggcactgggccgcccgacgtcgagcccgaagccgcgccaggcgatgggaggccgcccctc
gagcggtgccttgcgcgcctgacggagaggctggggcgcatccacgcggctctgcccaag
tgcacggccttcatgatttattcaggctctggcgatccgcgcgagatggcgcgcatgcag
gcggtacatgcacagtggcgcaaagaatacaacaccccgggtaagaagtgggatcagttg
agcgtcaagtggacagatgcagaggatcaagcgctcaagaaggcggttaggcgggcgaga
gaaggactgggcttcatctcagtcaagtga
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