Verticillium dahliae: VDAG_03521
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Entry
VDAG_03521 CDS
T03450
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_03521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_03521
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
VDAG_03521
Prokaryotic type
Archaeal type
TFB
VDAG_03521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
PARP_reg
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
20704984
NCBI-ProteinID:
XP_009655681
UniProt:
G2WZS9
LinkDB
All DBs
Position
6
AA seq
352 aa
AA seq
DB search
MLNPAGAPALDEHGNAIGDFKQDLNIIVECPDCREQPPNLVEEFSSGDMVCGSCGLVVGE
RIIDTRSEWRTFANDDQGNDDPSRVGDAGNPLLDGAQLETSIAFSEGRDHKNLARIQNKS
QTDKNTKAIGSAFREISAFTDSINLGKNVADGAKHIYKLCHDHSFMKGKPQEALVAGCIF
IACRQAGVGRTFREIYQVTNVSKKEIGRVFKALESFLQKIKETNPGGNAIQDLSGYKAST
STNAEDLCTRFTSQLPFRQSQKIENVSRALARKTVSVSELAGRSPLSVSAACIYMASHLM
EEAKTSKDIAAVAGVSDGTIKTAYKFLYQARERLIEKEWGVSQKAIDSLPVN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatcccgccggagcgccagctctagacgagcatggcaacgccatcggcgacttc
aagcaggacctcaacatcattgtagagtgtcctgactgccgcgagcagcctcccaatctg
gtggaggagttctcttctggcgacatggtttgtggctcttgcggcctcgttgtgggcgag
cgcatcattgacacccgctctgaatggcgtacgttcgccaatgacgaccagggcaacgac
gacccgtctcgtgtcggtgacgctggcaaccctctgctcgacggtgcccagctcgagacg
agcattgccttttctgagggcagggaccataagaaccttgcgcgtatccagaacaagtcg
caaacagataagaacaccaaggccatcggttccgctttccgcgagatcagcgcctttact
gacagcatcaatttgggaaagaacgtggcagacggtgccaagcacatctacaaactttgc
cacgaccacagctttatgaaggggaaaccccaggaagctctcgtggccggctgcattttc
attgcatgccgtcaggcaggtgttggtcgtactttccgagaaatctaccaagttaccaac
gtctctaagaaggagatcggaagggtctttaaagctctggagtcattcctgcaaaagatt
aaagagaccaaccctggcggcaatgccattcaagatcttagcggctacaaggcctcaacg
tcgaccaatgccgaagatctctgcactcgtttcacttcgcagctgccattcaggcagtcg
cagaagattgagaacgtgtcgcgcgctctcgctcgtaagacggtcagcgtgtccgaactt
gcgggtcgttcgccactgtccgtctctgcggcctgcatctacatggcgtcacaccttatg
gaggaggctaagacgtccaaggacattgcagcggtagccggtgttagcgacggcactatc
aaaacagcgtacaagttcttgtaccaagctcgcgagcgtctcatcgagaaggaatggggc
gtaagtcagaaggccattgacagcctgccggtgaactag
DBGET
integrated database retrieval system
