Verticillium dahliae: VDAG_03727
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Entry
VDAG_03727 CDS
T03450
Name
(RefSeq) hypothetical protein
KO
K14324
histone deacetylase complex subunit SAP18
Organism
vda
Verticillium dahliae
Pathway
vda03013
Nucleocytoplasmic transport
vda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VDAG_03727
03015 mRNA surveillance pathway
VDAG_03727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vda03019
]
VDAG_03727
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_03727
Messenger RNA biogenesis [BR:
vda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
VDAG_03727
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
VDAG_03727
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
20705190
NCBI-ProteinID:
XP_009652106
UniProt:
G2X0E8
LinkDB
All DBs
Position
3
AA seq
227 aa
AA seq
DB search
MVRRRIATDRFSRPDEFATRALPPSLDLYTWPSCTLDELAHQLAAERPALLPDPAVGTRL
AFRLIFPDARSMDNASHTAPRFMVKDLGSVVIGDGGPGLDVAAADDATDEADRVWPVRQR
GGIKDGLQTLEGSKFVVGDYVSCAILPPLPDGAVAPEPTRHIRAGPSGGPPTHHGRRDLG
AGRGRDWGAGGFPHGVPHGEWRRGEALPDGPDRGAWGRGRNAGRGGR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggttcgacggaggattgccactgaccgattctccagaccagacgagttcgccactcgc
gccctcccgccgtctctcgatctctacacctggcccagttgcaccctcgacgagctggcg
catcagcttgccgccgaacgccccgcccttctcccagacccggcggtcggaacacgactc
gcctttcgcctgatcttccccgacgcgcgcagcatggataacgccagccacacagctcca
cgcttcatggtgaaggacctcggcagcgtcgtcattggcgatggcgggccgggcttggac
gtggctgctgcagacgatgctacggacgaagcggacagggtctggcctgtgcggcagcga
ggcgggatcaaggatggcttgcagacgctggagggctcaaagtttgtcgtcggtgattac
gtctcgtgcgctattctgccaccgctaccagatggtgccgtggcgccggagccgacccgt
catattcgcgcaggaccctcgggcggtcctccgacgcatcacggacggcgtgacctgggg
gccggtcggggcagagattggggggcgggcgggttccctcacggcgtccctcacggcgaa
tggaggcgcggtgaggccctgccagacggacctgaccgcggcgcctggggcagggggagg
aatgcgggcagaggcggccgctga
DBGET
integrated database retrieval system