KEGG   Verticillium dahliae: VDAG_03727
Entry
VDAG_03727        CDS       T03450                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
vda  Verticillium dahliae
Pathway
vda03013  Nucleocytoplasmic transport
vda03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDAG_03727
   03015 mRNA surveillance pathway
    VDAG_03727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vda03019]
    VDAG_03727
   03036 Chromosome and associated proteins [BR:vda03036]
    VDAG_03727
Messenger RNA biogenesis [BR:vda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     VDAG_03727
Chromosome and associated proteins [BR:vda03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     VDAG_03727
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 20705190
NCBI-ProteinID: XP_009652106
UniProt: G2X0E8
LinkDB
Position
3
AA seq 227 aa
MVRRRIATDRFSRPDEFATRALPPSLDLYTWPSCTLDELAHQLAAERPALLPDPAVGTRL
AFRLIFPDARSMDNASHTAPRFMVKDLGSVVIGDGGPGLDVAAADDATDEADRVWPVRQR
GGIKDGLQTLEGSKFVVGDYVSCAILPPLPDGAVAPEPTRHIRAGPSGGPPTHHGRRDLG
AGRGRDWGAGGFPHGVPHGEWRRGEALPDGPDRGAWGRGRNAGRGGR
NT seq 684 nt   +upstreamnt  +downstreamnt
atggttcgacggaggattgccactgaccgattctccagaccagacgagttcgccactcgc
gccctcccgccgtctctcgatctctacacctggcccagttgcaccctcgacgagctggcg
catcagcttgccgccgaacgccccgcccttctcccagacccggcggtcggaacacgactc
gcctttcgcctgatcttccccgacgcgcgcagcatggataacgccagccacacagctcca
cgcttcatggtgaaggacctcggcagcgtcgtcattggcgatggcgggccgggcttggac
gtggctgctgcagacgatgctacggacgaagcggacagggtctggcctgtgcggcagcga
ggcgggatcaaggatggcttgcagacgctggagggctcaaagtttgtcgtcggtgattac
gtctcgtgcgctattctgccaccgctaccagatggtgccgtggcgccggagccgacccgt
catattcgcgcaggaccctcgggcggtcctccgacgcatcacggacggcgtgacctgggg
gccggtcggggcagagattggggggcgggcgggttccctcacggcgtccctcacggcgaa
tggaggcgcggtgaggccctgccagacggacctgaccgcggcgcctggggcagggggagg
aatgcgggcagaggcggccgctga

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