Verticillium dahliae: VDAG_03750
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Entry
VDAG_03750 CDS
T03450
Name
(RefSeq) DNA repair helicase RAD25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
vda
Verticillium dahliae
Pathway
vda03022
Basal transcription factors
vda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDAG_03750
09124 Replication and repair
03420 Nucleotide excision repair
VDAG_03750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_03750
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_03750
Enzymes [BR:
vda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VDAG_03750
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VDAG_03750
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VDAG_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
SIN1
AAA_34
Motif
Other DBs
NCBI-GeneID:
20705213
NCBI-ProteinID:
XP_009652129
UniProt:
G2X0H1
LinkDB
All DBs
Position
3
AA seq
792 aa
AA seq
DB search
MPPKRKAIGAVTGGGKVGKGSRVSTPAGAATPRSIGSDNESSAAEALSEGEEDVNIEKNV
GHFSVEGYERPSKSATSHIFGKRDYSYLNLKPDFQNRPLWIDASKARIFLESFSPLAQQC
QDFLITIAEPISRPSFVHEYALSPHSLYAAVSVGLSPADIINTLERFLKTPLPKQIREFI
EGCTASFGKVKLVLKNTKYFVESADPVVLQKLLQDPIIGPLRTHTGSGAITTTAAPKQAP
LVIPGTTNAAGVRQAGQANNAQGADADKAKEDEVYAALNDDDDEEAEFTHSFEIPDSAVE
DVQKRCLDLQYPVLEEYDFRKDEFNANLEIDLRPGAQIRPYQEKSLSKMFGNGRAKSGII
VLPCGAGKTLVGITAACTVKKGVIVLCTSSMSVVQWRNEFLKWSNIKPEDIAAFTSDNKG
QTFTGSTGIIVTTYSMVTQTRERSHEAKKMMDFLQHREWGLMLLDEVHVVPANIFRKVTS
SIKTHSKLGLTATLLREDDKISDLNFLIGPKLYEANWMELSQQGHIARVQCAEVWCSMPT
EFYDEYLKAPPRKRSLLYIMNPAKFQACQYLINYHESRGDKIIVFSDNVYALKAYAMKLK
KVFIYGETGQAERLQVLENFQHNPQVNTLFLSKIGDTSLDLPEATCLIQISSHYGSRRQE
AQRLGRILRAKRRNDEGFNAFFYSLVSKDTSEMFFSSKRQAFLVDQAERRELLEKVLVEN
VGNEEEFVDDLFHSGTMGRKPKKKGARRTAGMLGDLSGGQDMAYIEQNKKTKTKKGESSA
FFRKIQRQAAKK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaacgcaaggctatcggtgccgtcacaggcggtggcaaggttggtaaagga
tcacgagtctcgacgccagctggagctgccaccccgaggagcattggtagcgacaatgag
tcttccgcggcggaggcgttgagcgagggagaggaggacgtgaacattgagaagaacgtg
ggccatttctccgtagaaggatacgagcgcccctcaaagtctgcgacctcgcacatcttt
ggcaagcgcgattactcgtacctcaatctgaagccggactttcagaacagaccgctgtgg
atcgatgcgagcaaagcgaggatcttcctcgagagcttcagcccccttgcccagcagtgc
caggacttcctcatcaccattgccgagcccatctcccgaccttccttcgttcacgagtac
gccctttcgcctcacagtctatatgctgccgtttccgtcggtctatcgcccgccgatatc
atcaataccctcgagcggttcctcaagacgccgctgcctaaacaaattcgagaattcatc
gaaggatgcacagccagtttcggcaaggtcaagctcgtcttgaagaataccaagtacttc
gttgaaagcgcagaccctgtcgtcttgcagaagctgctgcaggaccccatcatcggacct
ctccgaacccacacaggcagtggcgcgatcacgaccaccgctgctccgaagcaggcgccc
ctcgtcatccctggcactaccaacgccgccggcgtgcgtcaggcaggacaagcgaacaat
gcacaaggcgccgacgccgataaggccaaggaggacgaggtgtatgctgcgttgaacgac
gatgatgacgaggaggccgaattcacgcattctttcgagattccggattctgctgttgag
gatgtccagaagaggtgccttgatctgcaatatcccgtgcttgaggagtacgacttcagg
aaagacgaatttaacgcgaacctggagatcgacctgcggcctggcgcgcagattcgtccg
taccaagagaagagtctgagtaagatgtttggtaacggtcgtgccaagagtggaatcatc
gtcttgccatgtggcgctggcaaaacgctcgtcggtatcacggcggcgtgcacagtgaag
aagggtgtcatcgtgctctgcacgagctccatgtcggttgtccaatggcgaaacgagttc
ctgaaatggtccaacatcaagccggaggacattgcggccttcacgtcagacaacaaggga
cagacctttacgggctctacgggcatcatcgtgacgacctactcgatggtaacgcagacc
agggagaggtcgcatgaggcgaaaaagatgatggacttcctccagcatcgcgagtggggc
ctcatgctgctcgacgaggtccacgtcgtaccggccaatattttccgaaaggtgacatcg
tcaatcaagacgcactccaaactcggtctcacggctacgcttcttcgtgaggatgacaag
atttcggatctcaactttctcatcggccccaagctgtacgaggcgaactggatggagctg
tcacaacaaggtcacattgcccgtgtgcagtgtgccgaggtgtggtgctccatgcccaca
gaattctacgacgaatacttgaaggcaccacctagaaagcgatcgctgctctacatcatg
aacccggccaagttccaggcgtgccagtatctgatcaactaccacgaatcgcggggcgac
aagatcatcgtcttctccgacaacgtgtatgccctcaaagcctatgcgatgaagctgaaa
aaggtcttcatctacggcgagaccggccaggcagagcggctgcaagtgctggagaacttc
caacacaacccgcaagtcaacacgctcttcctgtctaagattggagacacgtcgcttgac
ttgcccgaggccacatgcctcatccaaatctcgtcccactacggttcccgacgtcaggag
gcgcaacgtctcggccgtatcctgcgagcgaagcgcaggaacgacgaaggcttcaacgcc
tttttctactcgctcgtgtctaaggatacctccgaaatgttcttctcctcgaagcgccaa
gccttcctggttgaccaggccgagcgccgggagctcctggaaaaggtgctcgtcgagaac
gtgggcaacgaggaggaattcgtcgacgacctgtttcactcgggcaccatgggacgcaag
cctaagaagaagggcgcccgacgcacggcgggcatgcttggggatctctctggtggccag
gacatggcctacattgagcagaacaagaagacgaagaccaagaagggcgagagcagcgct
ttcttccggaagatccagaggcaagcggcgaagaagtga
DBGET
integrated database retrieval system
