Verticillium dahliae: VDAG_03945
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Entry
VDAG_03945 CDS
T03450
Name
(RefSeq) Rpb7-binding protein seb1
KO
K15560
protein NRD1
Organism
vda
Verticillium dahliae
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vda03021
]
VDAG_03945
Transcription machinery [BR:
vda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
VDAG_03945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
Motif
Other DBs
NCBI-GeneID:
20705408
NCBI-ProteinID:
XP_009652324
UniProt:
G2X116
LinkDB
All DBs
Position
3
AA seq
703 aa
AA seq
DB search
MASPVAELEAGLQAMSHLKPPGVSGSRISSITALCVGSVQSESVLIQKIYTHFKKTAGDH
KLGVLYVVDSVTRKWLERAKSSGQDVDGSATDGTFAAGVHRVTELMPVLMNDIVQSAPEN
HKEKISKLLDIWEKGQTFPQSMIDSFRTKLATPPVAAFVKSTTPEGSPPPGLLAFLGLAP
STNAAKPPAAPPSSNAIMEALANIARTNGPASQQHVPTPAHPPPTAAPSALNGLAGLLNT
ISQRQPAPQATNALPPSYSVPPPPPAAASGPAPPMPYAYPPQAAHPPAHNQQAPPPAFSG
LMGTGYPGVPPPPAAPQALTPDVQQQVMLIKALAEQGVPFDQIPALINTMQQAGVMPHLG
GPAAPAAQPPYPAASAPTWGAAAPATSNGHADSRDRYGYNGGQRSPDRYPNRSRSRSPGR
RWESRDKTRNGRDDFGHRQDDAVRSSEYRQRSPAGRRASPSGPPQHSQYEKWVEYDRTLP
EGKIRVYSRTLFVGGVTCSEPELRNIFTQYGQVQTCIVNKDKRHAFVKMLTRKDAEAAKE
ALEFPQGPEGLQLRTRWGVGFGPRQCSDYSTGISIIPISELTEADRKWMLTAEYGGSGGK
PIETGLVVEEPDIEIGAGVSSKAISRRMQTDKGGSHGPKSSHVDDRWRRKNGGGHGGRDR
RDDMKLSGANSQPIANNQFVQGNGFNGMPSASSNYGGWQQNSQ
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcctgttgctgagctcgaggctggcctgcaggccatgtctcaccttaagcct
cctggtgtatctgggtctcgcatttcttccataacagcgctctgcgttggcagcgttcag
tctgaatctgtcttgatccaaaagatttacacacacttcaagaagacagcaggcgaccac
aaacttggagtgctatacgttgtagactcggtaacgcgcaagtggttggagcgagcgaaa
tcctccggccaggacgtagatggctccgctactgacggaacctttgctgctggcgttcac
cgcgtgacggagctgatgcccgtgttgatgaatgatattgtccagtctgcaccagaaaac
cacaaggagaagatctcgaagcttctggatatctgggaaaagggccagacctttccccag
tccatgattgactcgttcagaaccaagctggccactccgcctgtcgctgcgtttgtcaag
tccacgacccctgagggaagtccccctcccggtcttcttgcattccttggcctggctcct
agtaccaacgccgccaaacctcctgccgcccctccgagcagcaatgccatcatggaggct
ctagcgaatattgcacgaacaaacggtcctgcttcacaacagcatgttcctacgccagct
catccacctccaactgcagccccgtccgcgctgaacggcctggcaggacttctgaacacc
atcagccaacgacagccagctcctcaggcgacaaatgccctcccgccgtcctactccgtg
ccgccgccaccaccagccgcggcttcgggccctgctccccccatgccttatgcttatccg
ccccaagcagctcacccgccggcacacaaccagcaggcccctccgcctgcgttctctggt
ctcatggggactggttatccaggcgtgccccctcctccggccgcgccacaggcccttacc
cctgatgtgcaacaacaggtcatgctgatcaaagctctcgccgagcaaggtgtgcccttt
gaccagattccggcccttatcaacacgatgcagcaagccggcgtgatgccgcatctaggg
ggcccggccgcacccgcagcccagcctccctatcctgcagcctcggccccgacgtggggt
gctgcggctcctgccactagcaatgggcatgcggattcacgtgaccgctacgggtataat
ggtggccaaagatccccagaccggtatccgaaccgctctcgatcccgctcgccaggtcgc
cggtgggaatctcgtgacaagacccgcaacggacgcgacgactttgggcaccgtcaagac
gacgcagttcgcagctccgagtaccgccaacgaagcccagctggtcgtcgcgccagccct
tcgggaccgcctcagcacagtcagtacgaaaaatgggtagagtacgatcggactcttcct
gagggcaagattcgcgtctacagccgaacattgtttgttggaggtgtcacatgctctgag
ccagagttgcgcaatatcttcacccagtatggtcaggtccagacctgcattgtcaataag
gataaaagacacgcctttgttaaaatgttgactcggaaggatgccgaagctgccaaagag
gcgctcgagtttccgcaagggcccgagggcttgcaattaaggactcgctggggtgttgga
ttcggtcctcggcaatgcagtgattattctacaggcatcagcatcatcccaatcagcgag
cttacggaagcagatcgcaagtggatgctgacagcagaatacggcggcagcggtggaaaa
cccatcgagactggtcttgtagtcgaagaacccgacatcgagattggtgctggcgtatcg
tctaaggctattagtcgccgcatgcagaccgataagggtggaagccatggacccaagtca
tctcacgtcgatgatcgatggcggcggaagaacggtggtggtcatggcgggcgagatcgt
cgtgatgatatgaaactctccggcgccaactcacagcccattgcgaacaaccagttcgta
cagggtaacggcttcaacggcatgccgagtgcgtcctcaaactacggcggatggcagcaa
aacagccagtag
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integrated database retrieval system
