KEGG   Verticillium dahliae: VDAG_03995
Entry
VDAG_03995        CDS       T03450                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
vda  Verticillium dahliae
Pathway
vda03030  DNA replication
vda03410  Base excision repair
vda03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDAG_03995
   03410 Base excision repair
    VDAG_03995
   03420 Nucleotide excision repair
    VDAG_03995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vda03032]
    VDAG_03995
   03400 DNA repair and recombination proteins [BR:vda03400]
    VDAG_03995
Enzymes [BR:vda01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VDAG_03995
DNA replication proteins [BR:vda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    VDAG_03995
DNA repair and recombination proteins [BR:vda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      VDAG_03995
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 zf_DPOE_2 RNase_H_2 NAPRTase_C
Other DBs
NCBI-GeneID: 20705458
NCBI-ProteinID: XP_009652374
UniProt: G2X166
LinkDB
Position
3
AA seq 2218 aa
MPNTSLRRPQKGYRRGGKVAFHGGRSTKPRTFEASSRAEATSADERWERTRLGNTIDEAM
GFARHEGGGRRCKGWLVNRAALDWSFMEDGGATFKATVEYEPYFLVAVKKGRESEVEEWL
KRVPGDGCVKTIRRVEKEDLKVPNHLLGYRRPFLELRFLNVNDLLAARRDIMPIAAKNKK
NVDVMEAYAEVATANGDIDLFDDSREDDRRANASFADASDFIVDIREYDVPYHVRVMIDL
NIRVGKWYLVDSKHGVTSIICNEERLAMADPVVMAYDIETSKLPLKFPDAATDQIMMISY
MIDGQGFLITNREIVSEDISDFEYTPKPEYPGAFMIFNEKDEKNVIERFFEHIKEARPTV
IATYNGDFFDWPFVETRASFHGIDMYQEIGWKKNSEDQYQCSYGVHMDCFHWVNRDSYLP
QGSRGLKAVTVAKLGYDPDELDPELMTPYAAERPQTLAEYSVSDAVATYYLYMKYVHPFV
FSLCTILPLGGDDTLRKGTGTLCEMLLMVQAYERKIVLPNKHMAPKEAFWDGHLLDSETY
VGGHVESIEAGVFRADIPVNFAVDPTAVDELLHDLDSALRFTIEVEEKKSMADVENYEEV
KAQVAARLQALKETPNRMERPLIYHLDVASMYPNIMTTNRLQPDSMVQESDCAACDFNRP
GKTCDRRLPWSWRGEYIPAKRDEYNMIRNALESEKFPGKYPNSPMRPFQDLSQDEQTALI
RKRLQMYSQKIYHKIHDSTIITKEAIICQRENPFYINTVRDFRDRRYDYKGKAKVWKGKT
EALKSSGASSTEVEAAKKMIILFDSLQLAHKVILNSFYGYVMRKGSRWYSLEMAGVTCLT
GATIIQLARGLVERLGRPLELDTDGIWCMLPATFPENFSFKMKGGKKVTVSYPCVMLNHL
VHAKFTNHQYQTLVDEKTFKYETHSDNSIFFEVDGPYKAMVLPTSKEEDKNLKKRYAVFN
DDGSLAELKGFEVKRRGELKLIKIFQQQIFKFFLEGTTLAECYTAVAKVANRWLDILHSK
GASLEDEELMELISENRSMSKTLEEYGSQKSTSITTAKRLADFLGEQMVKDKGLNCKFII
CARPKNAPVTERAVPVAIFSAEEQTKRAYLKKWLKEEPADTDPRALLDWDYYLERLGSVI
QKLITIPAALQKVRNPVPRVPHPDWLQRRINIKDDKMKQKKMTDMFTKGPLEDITNLNGR
GAEDMEDFGTKLLKPKTVTSLVAASQSAATSQKRKSPEPTESLDPFAALPKTMPSPSENY
PAFLEYQKQKWKIQRQARIQRRKLFGDRRNNMQSNIQTTFMHQAHNTFTNNWHLLHLKTT
ETPGVVNAYVLIHAKIHTVKIKVPRVVFLNLKSNDMPDVDIAGCEVEQVNHTLPNGHSST
HLFKLTVPEDVYFNEADSFSTLFNHPSVEGVYEKNLPLNIRAVLQLGNICTVDETKDGVL
GKGLDEGFDLVGLMRPLKPKPYLEASPLAYLYISQISAGERQIFGLFSTTNSQAHIVILN
KSRDSGQELPNVSRIYTDTLKQRDQEAEGTNWQECFPYQEKLNFKITQVTTRRKLHLELG
DIVKKLRKDEVKPLMLVIQSSQRNHLISEVPVLSEFPVLALKYDTTDSSLPPLGWQTVAA
RRLVGHYLGLGSWVMHLMSLARYGDVPLCNLERDDPRFLIDIAYARRLQNNNVVLWWSAS
PRPDHAGYEKDDVTGPLETVSMPNVNKPGTFASVCIDLEVRNLAINTILTSSLINDLEGA
DSVSFNPAAEAGANADEVISFDNAFANAGVLVLREMVKAWWVEACKGNTMADVMVQHLVR
WVESPDSFLYDRALHYYVQMMSRKAFQQLMGDFRKVGSQVIFANSNRLLLQTTKAEVGTA
YAYSNYVIKSIKSKPLFHFIDLEIKEYWDYLVWYDEFNYGGKACQEVVEADNQNLETIMH
WQMSTFLPERLQPIFQEWVIEFINLMHRNKRAFDIEDFSTQRLTQLPPSRKDPNDESALL
LGKSFEKPLKKTISNLLAVQKRELLHPELAGDYSFPVLPGSHLATYTDGAGARSGPLLEL
VKSLMQVLSLDRNITLEARLLRKELLAMFDVREFSKGATFQNPSASLKMPQLSCDVCTMA
RDMDFCRDADLLPDQGQTHKPWRCGFCEAEYDRNTIEERLIAQVEGFAVEWASQDVQCEK
CRALRLNEFMEHCVCSGAWVESVSREDILKKVAVYGNVAKFYGLRMLKEVVEGLKAGL
NT seq 6657 nt   +upstreamnt  +downstreamnt
atgccaaacacatcactgcggcgcccgcaaaagggataccgccgcggcggcaaggtcgcc
ttccacggcggccgctccacgaaaccccgaaccttcgaggcctcctcccgcgccgaggcc
acctccgccgacgagcgctgggagcgcacccgcctgggcaacacgatcgacgaggccatg
ggcttcgcgcgccacgagggcggcggccggcggtgcaagggctggctcgtcaaccgcgcc
gcgctcgactggtccttcatggaggacggcggcgcgacgttcaaggcgacggtggagtac
gagccctactttctcgtcgccgtcaaaaagggccgcgagagcgaggtcgaggagtggctc
aagcgcgtgcccggcgacggctgcgtcaagacgatcaggagggtcgagaaggaggacctg
aaggtgccgaaccacttgctgggctaccggcggccgttcttggagctgcggttcctcaac
gtcaacgacttgctggcggcgcgcagggacattatgcctattgcggcgaagaataagaag
aacgtcgatgtgatggaggcgtatgcagaggttgccacggcgaatggcgacattgacctt
tttgacgattcacgagaagacgatagacgagcgaatgcttcttttgccgatgcgagcgac
tttattgtcgatatccgagagtacgatgtgccgtaccatgtacgagtaatgattgatttg
aatatacgagtgggaaaatggtacttagtggactcaaaacacggcgtcacatcgatcatc
tgcaacgaggagcgactagccatggccgaccccgtggtcatggcctacgatatcgagacg
tcgaaattgcccctgaaattccctgacgccgccacggaccagatcatgatgatatcgtac
atgatcgacggccagggtttcctgattaccaatcgcgagattgtctctgaagacatttca
gatttcgaatacacgccaaaacccgagtacccaggtgcattcatgattttcaacgagaag
gacgagaagaatgtcattgagagattcttcgagcacatcaaggaggccagaccaactgtc
attgcaacgtacaacggtgacttcttcgattggcccttcgtggaaacgagagccagtttc
catggcatcgacatgtaccaggagattggctggaaaaagaacagcgaggaccagtaccaa
tgcagctatggcgtgcacatggactgcttccactgggtcaatcgtgattcatacctgcca
caaggatcgcgaggtctgaaagctgtcacagtcgcgaagctcggatacgacccagacgag
cttgacccagaactcatgacgccctatgccgctgagcgaccgcaaaccctggcagagtat
tctgtttccgatgctgttgcaacctactacctgtacatgaaatacgtccacccgttcgtc
ttctccctctgcacgattctgccgctgggcggcgatgacacgctgaggaaaggtaccggc
acactttgcgagatgctactgatggtgcaggcgtacgaaaggaaaattgtgcttccaaac
aagcacatggcgccaaaagaggccttctgggacgggcacttgctcgattccgaaacttat
gtcggtggtcacgtcgagagtatagaagctggtgtgttccgggccgacataccagtcaac
ttcgccgtggacccaacagcagtggacgagctgctccatgaccttgattcagcactacga
ttcaccatcgaggtcgaggagaaaaagtccatggctgatgtcgagaactacgaggaggtc
aaggcacaagtagccgcacgactacaggctctcaaggagacaccaaatcgcatggagcga
cccctcatctaccacttggacgttgcttccatgtatcccaacatcatgacgactaatcga
ctgcaacccgactccatggtccaggaatccgactgtgcggcttgcgacttcaacagaccg
ggcaagacctgcgatcgacgtctgccatggtcgtggcgaggagagtacatccctgcgaag
agggacgagtacaacatgatccgaaacgcgctggaaagcgaaaagttccctgggaaatat
cccaactcgcccatgcgaccgttccaagacttatcgcaagacgaacaaacggctctcatc
aggaaacgtctgcaaatgtattcgcagaagatctaccataagattcacgactccaccatc
ataaccaaggaagccatcatttgccagcgagagaatccgttctacatcaacacggtgcgc
gactttcgcgaccgtcgttacgactacaaaggaaaggcgaaagtctggaaggggaaaaca
gaggccctcaagtcatctggagcaagctctactgaagttgaagccgcgaagaagatgatc
atcttgttcgattcgctacaattggcgcacaaggtcattctcaattccttctacggctac
gtcatgcgaaagggttcgcgatggtactcgctcgagatggctggtgtcacatgcttgacg
ggcgcgacgattattcagcttgctcgtggtcttgtcgagcgtcttggtcgtccattggag
ctggataccgacggtatctggtgcatgttgcctgccacgttcccggagaacttctcgttc
aagatgaaaggcggaaagaaggtcactgtctcgtacccctgtgtcatgttgaaccatctt
gtccatgccaagttcacgaatcaccagtaccaaaccctggttgacgagaagacgttcaag
tatgagacgcacagcgacaactccatctttttcgaagtcgacggtccgtacaaggctatg
gtcttgccgacttcaaaggaagaggacaagaacttgaagaaacgttatgctgtcttcaac
gacgatgggagtctggcagagctcaagggtttcgaagtcaagcgccgaggtgagctaaag
ctcatcaagatcttccagcaacaaatcttcaaattcttcctggaaggcacaacgctggcc
gagtgttacacggccgttgcaaaggtggctaaccgctggctcgacatccttcacagcaag
ggcgcatcgctcgaggacgaggagctgatggagctgatttcggagaaccgaagcatgtcc
aagacattggaggagtacggctcgcagaaatcaacatccatcacaacggccaagcgctta
gccgacttcctgggtgaacaaatggtcaaagacaagggtctgaactgcaagttcatcatc
tgcgcaagaccaaaaaatgcacctgtcacagaacgagccgtgccggtagcaatcttttct
gcggaggagcagacgaagcgggcgtatctcaagaagtggctcaaagaagagcccgctgac
actgatcctcgggctcttctcgactgggactactatctcgagcgtctgggctccgtcatt
caaaagctcatcaccattcctgccgcactgcagaaagtccggaacccagtgcctcgagtg
cctcaccccgactggcttcagcgcaggattaatatcaaggacgacaagatgaagcagaaa
aagatgacagatatgtttaccaagggaccccttgaagacatcacaaacctgaatggacgt
ggtgcagaagatatggaagatttcggaacgaagctgctcaagcccaagactgtaacgtcc
ctcgttgcggcatcgcagtctgcagcaacgtcgcaaaagagaaagtcccccgaaccgaca
gagtcactagatcctttcgctgcgttacccaaaactatgccttcgccttcagagaactac
cctgccttcctcgagtatcagaagcagaaatggaagatccagagacaagcacgcatccaa
cgacgcaaactgtttggtgacagacgcaacaatatgcagagcaatatccagacaacgttc
atgcaccaagctcacaacacattcaccaacaactggcacttgttgcacttgaaaacgacg
gagacaccgggtgtcgttaacgcctacgttcttattcatgccaagattcacacagtcaag
atcaaggtgccacgcgtggtgttcctcaatttgaagagtaatgacatgcctgatgtcgat
attgctggctgtgaagtggaacaagtcaaccatacgcttcccaacggccactcatcaaca
catctcttcaagctcacggtgcctgaggatgtttacttcaacgaggccgacagcttctcc
acactgttcaaccaccccagtgtggaaggtgtctatgagaagaatttgcccctcaatatc
cgtgctgtacttcagcttggcaacatttgtactgttgatgaaaccaaggatggggttctt
ggcaaaggtcttgacgagggcttcgatcttgtcgggttgatgcgacctctgaaacccaag
ccgtatctggaagcctctcccctggcctatctttacatctctcagatctccgcgggcgaa
cgccaaatctttggtctcttctccacaaccaacagccaggcacacatcgtcatcctgaac
aagagtagagactcgggacaagagctaccaaatgtttccaggatatacacggataccctc
aagcagcgcgaccaagaagcggagggcactaactggcaggagtgcttcccgtaccaggag
aagctcaatttcaagatcacccaagtcacgacacggaggaaacttcaccttgaactcggc
gacattgtcaagaagctgcgtaaggacgaggtcaaaccgctgatgctcgtcattcaatca
tcacaacggaaccatttgatctcggaagtacccgtcctcagtgaattccccgtcctagct
ttgaagtacgacacgaccgacagctcgctgccgcccctcggctggcagactgttgcagcc
agaaggcttgtaggccattaccttggtctgggatcatgggttatgcatctcatgtctctc
gcgagatacggcgatgttccactttgcaacctggaaagggacgacccacgcttcttgatc
gacattgcctacgccagacgacttcaaaacaacaatgttgtcctgtggtggtccgccagc
ccacgtccggatcatgctggttacgaaaaggacgatgtcacgggtcccctggaaacagtt
tccatgccgaacgtcaacaaacccggcactttcgcttctgtctgcatcgatcttgaggtc
cgcaatctggccatcaatacgattctgacctcctctttgattaatgatcttgagggcgct
gactctgtgtcttttaaccctgccgcggaggctggagcaaacgctgatgaggtcatctcg
ttcgataatgcgttcgccaacgcaggagtactggttctgcgagagatggtcaaggcgtgg
tgggtagaggcctgcaagggcaacaccatggccgatgtcatggtgcagcatcttgtgcgt
tgggttgagagtcctgattccttcctctacgaccgcgcactgcactactacgtgcaaatg
atgtcgcgcaaagccttccaacagcttatgggcgatttccgcaaggtcggtagccaagtc
atctttgccaactcgaatcgtctgcttttgcagaccacgaaagctgaagtcggaaccgcg
tacgcctacagcaactacgtcatcaagtcaatcaagagcaagcccctgttccactttatt
gatctcgagatcaaggagtactgggactacctcgtctggtatgatgagttcaactatgga
ggcaaggcgtgccaggaggtcgtcgaggcggacaaccagaacctcgagacgattatgcac
tggcaaatgtctaccttccttcccgagcgtcttcagcccattttccaagaatgggtcatt
gagttcatcaacctcatgcaccgcaacaaacgggcctttgatattgaggacttctccacc
cagcgtctgacccagctaccaccctctcgcaaagacccgaacgacgagagtgccctcctt
ctcggcaagagcttcgagaagccccttaaaaagaccatctcgaaccttctcgctgttcag
aagcgcgagctcctccaccccgaactcgcgggcgactattccttccctgttctccctgga
tcccatctcgccacctataccgacggcgccggtgcacgctccggcccgcttctcgagctc
gtcaagtctctcatgcaagtcctcagcctggaccgcaatatcacgctggaggcgcgtctg
ctgcgcaaggagctcctcgccatgtttgacgtccgcgagttctccaagggcgcgacgttc
cagaacccgagcgccagcctcaagatgccgcagctcagctgcgacgtgtgcaccatggcg
cgtgacatggacttctgtcgcgacgccgacctgctgcccgaccaggggcagacgcacaag
ccttggcggtgcgggttctgcgaggccgagtatgaccgcaacaccatcgaggagaggctc
atcgcgcaggtcgaagggttcgccgtcgagtgggcgagccaggacgtgcagtgcgaaaag
tgccgcgcgctgagactgaatgagttcatggagcactgcgtctgcagcggcgcgtgggtc
gagagcgtgagccgtgaagacatattgaagaaggttgcagtgtacggaaacgtggccaaa
ttttacggcttgaggatgttgaaggaggtggtcgaaggcttgaaggctgggttgtag

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