Verticillium dahliae: VDAG_04073
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Entry
VDAG_04073 CDS
T03450
Name
(RefSeq) regulator of V-ATPase in vacuolar membrane protein
KO
K24155
rabconnectin-3a
Organism
vda
Verticillium dahliae
Pathway
vda04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
VDAG_04073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vda04131
]
VDAG_04073
Membrane trafficking [BR:
vda04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
VDAG_04073
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
VDAG_04073
RAVE complex
VDAG_04073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
20705536
NCBI-ProteinID:
XP_009652452
UniProt:
G2X1E4
LinkDB
All DBs
Position
3
AA seq
1325 aa
AA seq
DB search
MRGILPGRPRSGLQALATGFWGSRQYTVYITGNAFAILDGPEQLVQTVYDEDEAALLAVA
FDEFSGKIATCTKSAVRVYKPLGHAEDALKWGLQSSFLIQTSETDPCLSWGASEELLVAA
STLRLYLTTSAAPSCFWEKALPNDAKSAQLSFDSAYIAVIGFYDTIVKVWRRLTYGADEV
CFDLACLPHPDLVTNIRWRKPYHTEQTIDNILYTTCTDFVLRIWTGSDSHSNQQLHLWAQ
VDLAWSVEGQALRSASKLSSAPALFILDGREVAAAAEKAVQGRPSGEQLPEAAVQRLIGV
ANRNPEFCFVLGDGDTISALALENVGSRSQKLKVTSVAHINSQDFTPREDFPSIAHDLHV
EVQAYCARDTGRLRILVHEFNGRIRIFETDLVDLIDPNLACHQFDHRCTWSGHSSPIEKI
VRNYSGRSVVSRTADGESVVWTHSGGRATSGLSRQSVVPEAGHIHRICVLRKGRFVVFLK
HGTISVWDCRRQKAIAMCHQPYELSGKPLCLLILPRQHRDDYRTVHIATITSEQKGIVWQ
LDLPPYMAPDAASQGGSREATLMEFCRFELQNIEGLAYVLPVDPAGSSPITTGFLDVFAK
DVAISYTQSGRVDFWTARIDNTDKRVEWLSTCCSETGLANPALVSGSTLKKAALVDSSRS
QLSIWDIGGARLEFSQDYEAHHTIRDLDWTSTPDSQSILAVGFQHRVVLLSQMRFDYLNK
GPAWAPIREISIRELTPHPIGDSAWLGDGHLVVGAGNQMLIYGRNFGLADSKVSTLRLPQ
KKDGVWDLFEAVQRLNGPLPIFHPQFLSQCILAGKTTLVHRILLALHQTFKYHIPGEQID
DYLGMELDMFYMDTVSSKQVVKQQSDSYLNRGASDDPMQETFTEDVAAAINERLTKVGLP
QLSGQEQMQLADIIECVGLVDKHRRSLDEDGARFMLFLRQHALRKGRMSEINISWREIVW
AFHSGSQDILVDFVIRQYHGSLLWESARESGMFMWLTDTNAMKAQFEIIARNEYTKSEMK
NPIDCSLYYLALKKKTVLQGLWRMASWNKEQGATQRLLANNFEDPKWRTTALKNAYALLS
KRRFEYAAAFFLLADHLTDAVNVCLHQLKDLQLAIAIARVYEGDSGPVLRKLLEDEVLNV
AAREGNRWLASWAFWMLGRKDMAVRSLITPVYTLLETPVVPDLRSKLFLTDDPALVVLYS
QLRQKTLQTLRGASKVTPRIEWEFVLHSAKLFDRMGCDLLGLDLVRNWEFPQPTATVGAL
LGGEANPLKLLRRRSSLVVDDMPFSSLRNEVRMAESGKGQSGRHQPPPTMFEEPDSSSLL
DSFGF
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtatcctaccagggagacccaggtccgggctccaagctttggcgacaggcttc
tggggatcaaggcaatatactgtatacatcacgggcaacgccttcgccatcctcgacggg
cctgaacaacttgtccaaacagtctatgacgaagacgaagcagctcttcttgctgtagca
tttgacgaattttcggggaaaatagcaacatgcacgaagtcagccgttcgagtctacaag
cctttgggacacgcagaggacgcactcaagtggggactgcagtcgtcgttcctaatccaa
acaagcgaaacagatccttgtctatcatggggagcttcagaagagcttcttgtcgccgca
tctacccttcgtttataccttacaacctcggcagccccgtcgtgtttctgggagaaggca
ctgccaaatgacgcgaagtctgcacagctttccttcgactctgcctatatcgccgtcatt
ggattctacgatacaatcgttaaggtttggcgaaggcttacctatggtgctgatgaggtc
tgtttcgaccttgcgtgtctacctcatcccgacttggtgacgaatatccgttggcgcaaa
ccgtatcatacagaacaaacaatcgacaacattctgtacaccacatgtactgacttcgtt
cttcgaatctggacagggtccgactctcactcgaaccagcaactccacttgtgggcacag
gtggaccttgcctggtctgtagagggtcaagccttaaggtcagcgtccaagctctcttcg
gccccggcgttgtttatccttgatgggagagaagttgctgctgccgccgaaaaagcggtt
caggggcgcccgtcgggtgagcaactgccagaggcggccgtgcagcgtctgatcggggtg
gcgaataggaacccagaattttgctttgttctcggcgatggggacaccatttcagccttg
gctttagagaatgtcggctccagatcacagaagctcaaagtaaccagcgtcgcgcacatc
aactcacaggactttaccccgcgggaggactttccttctatagcgcacgatcttcatgtt
gaagtccaggcatactgcgctcgcgacacgggtcgtctccgaatcttagtccatgagttc
aatggcaggatccgcattttcgagactgacctggtggatttaatcgaccctaatcttgct
tgccatcaatttgatcatcgatgtacttggtccggccattcgtcaccgattgagaaaata
gttcgcaattacagcgggcgatcagtcgtatcaaggacggctgatggagagagcgttgtc
tggacacattctgggggcagagcgacctctggactatcccggcaaagcgtcgtaccggag
gcgggtcacatacaccgcatatgtgtccttcggaaaggtcgatttgttgtgttcctgaag
catggaacaatttccgtatgggactgtcgccgtcaaaaggcgattgcaatgtgccaccag
ccctatgagctctctggaaagcctctgtgcctcctgatattaccaagacagcatcgagac
gactatagaactgtccatatcgccacaatcacctcagagcagaagggcattgtgtggcaa
ctcgacttgccaccatatatggcgccagatgcagcgtctcaagggggctcgcgtgaagcg
accctcatggagttctgcagatttgagctgcaaaatattgaggggcttgcttatgtgttg
cctgttgatcccgcagggtcttccccgattacgactggtttcttggatgtatttgccaag
gacgttgccatttcctacactcagtcaggccgtgttgatttttggacagcccgcattgac
aacactgataagcgcgtagagtggctgtcaacctgttgttcggagactggtcttgcgaac
ccagcgctcgtgagcggcagcacgctcaaaaaagcagccctcgttgattcttcgcgatcg
cagttatccatctgggatattggtggtgcccgccttgagttttcccaagactacgaggcc
caccacacgatcagagacctcgactggacttcaaccccagattcccagtccattctggct
gttggcttccaacatcgggttgtcttgttatcgcaaatgcgttttgactacctcaataaa
ggccctgcctgggctccgatcagagaaattagcatacgcgagctaactcctcatccaatc
ggtgactctgcttggcttggagacggccatctcgttgtcggtgcgggtaatcagatgctg
atttatgggagaaactttggtctcgccgattccaaggtcagtaccttgaggctgccacag
aaaaaagatggtgtctgggacctttttgaggctgtacaaagactcaacgggccattgccg
atatttcatccccagtttctgagccagtgtatattggcgggaaagactaccttggtacac
cggatccttctcgcgctacaccaaacattcaagtatcacattccaggcgaacaaattgac
gactatcttggcatggaactcgatatgttttacatggatacggtttcgtcgaaacaagtg
gtcaagcagcaatccgattcgtatttaaatcgcggtgcctcggatgatccaatgcaagag
accttcacggaggatgttgctgcggctattaatgagcgactgaccaaggtcggtctccca
cagttgtcaggacaagagcagatgcaactagccgacatcattgagtgtgtaggcttggtc
gacaaacaccgtcgctcattagacgaggatggcgctaggttcatgctcttccttcgccaa
cacgccttgcgcaaagggcgtatgagcgagatcaatatttcttggcgggagatcgtgtgg
gcatttcattctggcagccaggacattctggtggattttgtgattcgacagtatcatggg
tcacttctctgggaaagtgccagggaaagtggtatgttcatgtggcttactgacactaat
gctatgaaggcccagttcgagatcatcgctcgaaatgagtataccaaaagcgagatgaaa
aacccgattgactgcagtctctactacttagctctgaagaagaaaactgtgcttcaaggg
ctttggcgcatggcaagctggaacaaggagcaaggcgccacgcagcgcctgctggccaat
aacttcgaagacccgaaatggcgaacaacggcactgaagaatgcatacgcactgttgagc
aagcgcagatttgagtatgcagcggcattctttctcttggcggaccatctaacagacgct
gtcaatgtttgtctgcaccagctcaaggacttgcaacttgctattgccatcgcccgagtg
tatgagggcgatagcggtccagtccttcggaagctcctcgaggacgaagtcctcaatgtc
gcagctcgcgaggggaatcgctggcttgcctcgtgggcgttttggatgctcggtcgcaaa
gatatggccgtcaggtcgctgattacgcccgtgtacactcttctagagaccccggtcgta
cccgacttgaggtctaagttgttcctgaccgatgaccctgccttggtagttctctactcg
cagcttcgacagaaaaccttgcagacccttcgaggagcatccaaagtaacgcctcggatc
gaatgggagtttgttcttcacagtgccaagctgttcgatcggatgggctgtgatcttctt
ggtctggatcttgtccgtaactgggagttccctcagccgacagcaacggtaggagccttg
ctcggaggcgaggccaacccgctgaagcttctgaggaggcgaagttctctcgtggtggat
gacatgcctttttcaagcctgcgcaacgaggtacgaatggcggaatctggaaaaggacag
tcggggagacatcaacctccacctacaatgtttgaagagccagactcgagctcgctgctg
gacagcttcgggttctaa
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