Verticillium dahliae: VDAG_04077 Help Entry VDAG_04077        CDS       T03450                                  Name (RefSeq) 5'-3' exoribonuclease   KO K12619   5'-3' exoribonuclease 2 [EC:3.1.13.-] Organism vda  Verticillium dahliae Pathway vda03008   Ribosome biogenesis in eukaryotes vda03018   RNA degradation Brite KEGG Orthology (KO) [BR:vda00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     VDAG_04077   09123 Folding, sorting and degradation    03018 RNA degradation     VDAG_04077  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vda03021]     VDAG_04077    03019 Messenger RNA biogenesis [BR:vda03019]     VDAG_04077    03009 Ribosome biogenesis [BR:vda03009]     VDAG_04077    03016 Transfer RNA biogenesis [BR:vda03016]     VDAG_04077 Transcription machinery [BR:vda03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      VDAG_04077 Messenger RNA biogenesis [BR:vda03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      VDAG_04077 Ribosome biogenesis [BR:vda03009]  Eukaryotic type   Pre-60S particles    RNases     VDAG_04077 Transfer RNA biogenesis [BR:vda03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     VDAG_04077 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_M XRN_N zf-CCHC_2 Motif Other DBs NCBI-GeneID:  20705540 NCBI-ProteinID:  XP_009652456 UniProt:  G2X1E8 LinkDB All DBs Position 3 AA seq 1013 aa AA seqDB search MGIPAAFRWLSNKYPKIISPVVEDQPLQMEDGTTIPVDTTGPNPNGEELDNLYLDMNGIV HPCSHPEDRPAPKDEEEMMLEVFRYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRSRRF RSAQEAQEKEVDKQELLKLLKQQNGGILPPETLESMNKKAFDSNSITPGTPFMDTLATSL RYWCAYKLNTDPAWARLKIIISDATVPGEGEHKIMNYVRSQRGSPDYDPNTRHVIYGLDA DLIMLGLATHEPHFRVLREDVFAQDAKAKMCKICGQKGHDARVCKGEAKDKDGEYDEQDK AVDLKPFIWLHVSIFREYLAIELDVPDLPFRFDLERAIDDWVFMCCFVGNDFLPHLPALE IRENGIDALTTIWKENLPRMGGYVTKDGHIDLKRVQLIMDGLAKQEDAIFRRRKEQEDRR EANAKRRKLQDERSGRGGRTDASGRGRGKPPLDNASSGLALFPVSGFPNADPSAVTHDMV VGRSSNANINANAANKSAANVIRERIQASGTQGKSTNGDATIHPNVEAPAVPEEGAAAAS SVVKRKADVLDEPSQLTPNTGPSAAEEAAIDHVRMWEEGYADRYYEQKFHVDRNDVAFRH KVAQAYVEGLCWVLLYYYQGCPSWDWYYPYHYAPFAADFADLDKIEISFEKGRISKPFEQ LMSVMPAASRRALPEVFHDLMLNEDSEVIDFYPQEFEIDLNGKKFAWQGVALLPFIDMPR LLAAVEKKYPLLSPEDAARNGIGRDVLLLSDAHHELYEDITSHFYSKKQGAPTFGLNPRT SDGMTGQVEKIADYLPHGSLEYPLDRKSMPSLDYDRSLSVYYEFPTTAPHKSMLLRGLKM PTTALGRSDIEQLRNKSSRSNRGGWGGVPSGRYNDGGRGRGRGGGYGGRGAFHYAESGGR TQQHSSHYQNGSASRDHYGAQKAPHPPSAWQPPPPGHPGFGMGLPPPPPPTHFNNGRPST YGLSHGSHEASLPYQNSYPAREDYGSRGRGGYQARGAGRSQNFHGDRQQPYRR NT seq 3042 nt NT seq  +upstreamnt  +downstreamnt atgggtattccagctgcgttcagatggctatcgaacaagtaccctaaaatcatctcgcct gtggtggaggatcagccgctacagatggaagacggaacgaccattccggtagacaccacc ggtcccaacccaaatggagaagaactggacaatctctaccttgacatgaacggtatcgtt cacccttgttcgcatccagaggatcgccctgcccccaaggatgaggaggaaatgatgctc gaggttttcaggtacaccgatcgagtagtgaacatggtcaggccacggaaactactaatg atcgctgttgacggtgtcgcgccacgagcaaagatgaaccaacagcgatcgcgccgattt cgctctgcacaggaagcacaagagaaagaggttgacaagcaggagcttctcaagcttctc aaacaacaaaatggcggcattttgccacctgagaccctcgagagcatgaataagaaggct tttgattcaaactcgatcacccccggcacacccttcatggacacacttgcaaccagtctg cgttattggtgcgcctacaagctcaatactgatcctgcttgggctcgacttaaaatcatc atctccgacgctacagttccaggcgaaggagagcacaagatcatgaactacgtccgctct caaagaggctcgccagactacgaccccaatacccggcatgtcatctatggcctggacgcc gacttgatcatgctgggtcttgctacccacgagccacatttccgcgtactgcgcgaggat gttttcgcacaagatgccaaggccaagatgtgcaaaatatgcggtcaaaagggacacgat gcgcgcgtttgcaaaggcgaggccaaggacaaagacggcgaatatgacgagcaagacaag gctgtagacttgaagcctttcatatggcttcacgtgtccatattccgagagtacctcgct attgagcttgatgtacccgacttgccgtttcgattcgatctcgagcgcgcaatagacgac tgggtattcatgtgctgtttcgtgggcaacgactttttgccccatctgccggccctagaa atccgagagaatggtatagacgcattaacgaccatatggaaagaaaacctacctcgtatg ggtggctacgtcaccaaggacggccacatcgatctgaagagggtacagctcatcatggat ggcttggcgaagcaggaggacgccatcttcaggcggagaaaagagcaggaagaccgccga gaagccaatgccaagcggagaaagctgcaggacgagcggagtggcagagggggccgtacc gacgccagcgggcgcgggcgcggcaaaccacctctggacaacgcatcctctgggctggcc ttatttcctgtctctggcttccccaatgctgaccccagcgctgtgacacatgacatggtt gttgggcgctcgtcgaacgccaacatcaacgcgaatgccgccaacaaaagcgccgctaat gtcatcagggagcgaatccaagcatcgggaacccagggcaaatcgacaaatggtgacgca acaatccatccaaatgtcgaagcacctgctgtacctgaagaaggtgcagccgcagcaagc tctgtggtgaaacgcaaggcggatgttctggacgagccatcgcaattaacacccaatacc ggaccgtccgccgcggaagaggctgcgattgatcacgttcgaatgtgggaggaaggttac gcagaccgctactatgagcaaaagttccacgtcgaccgtaatgacgtcgcctttcgtcac aaggtcgcacaagcctatgtcgagggtctttgctgggtgcttctctattactaccaaggc tgcccgtcttgggattggtactatccctaccactatgcgccgttcgcggccgattttgcc gacttggacaagatcgagatcagtttcgagaagggacgaatctcgaagccttttgaacaa ctcatgagtgttatgccagctgcatctcgccgtgcacttccagaggtctttcatgatctc atgctcaacgaggacagcgaggtcatagacttctatccccaagagttcgagattgacctc aatggcaagaagtttgcctggcaaggtgttgctttactccctttcattgacatgccacgg cttttggcagcagttgaaaagaagtatcccttgctcagccccgaggacgctgcgcgtaat ggaatcggtagggacgttttgttgctgtccgacgcgcatcacgagctttatgaagacatc acgagtcacttctactccaagaagcaaggcgcgcccaccttcgggttgaatcctcggacc agtgatggcatgaccggccaagtcgagaagatcgccgactatctgccacatgggtccttg gagtatcctttagacaggaaatcaatgcccagcctggactacgaccggtccctcagtgtt tattatgagttcccaactacagcccctcacaagtccatgctcttacgcgggctgaagatg cctaccacagctcttggtcggtctgacatcgagcagctgaggaacaagtcctctcgctcg aatcgaggcggatggggcggcgtcccttcgggacggtataatgatggtggtcgcggccga ggccgcggaggcggctacggtggtcgtggtgcctttcactacgcggaatctggaggcagg acccaacaacactcatcacattaccagaacggttccgcctctcgcgaccactatggcgcc cagaaggcaccacatccgccttcagcgtggcaaccaccaccaccaggtcaccctggcttt ggcatgggtcttcctcccccaccccctccaacacacttcaacaatggccgcccgagtacc tatggactgtctcatggaagtcacgaggcatctctgccataccagaactcgtatcccgcc cgagaagactatggatcaagaggtcgtggaggctaccaggctagaggagctggacgtagt cagaatttccatggcgataggcaacagccctatcggagatga

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