KEGG   Verticillium dahliae: VDAG_04192
Entry
VDAG_04192        CDS       T03450                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
vda  Verticillium dahliae
Pathway
vda03030  DNA replication
vda03410  Base excision repair
vda03420  Nucleotide excision repair
vda03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vda00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDAG_04192
   03410 Base excision repair
    VDAG_04192
   03420 Nucleotide excision repair
    VDAG_04192
   03430 Mismatch repair
    VDAG_04192
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vda03032]
    VDAG_04192
   03036 Chromosome and associated proteins [BR:vda03036]
    VDAG_04192
   03400 DNA repair and recombination proteins [BR:vda03400]
    VDAG_04192
DNA replication proteins [BR:vda03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    VDAG_04192
  DNA Replication Termination Factors
   ELG1-RFC complex
    VDAG_04192
Chromosome and associated proteins [BR:vda03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    VDAG_04192
DNA repair and recombination proteins [BR:vda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     VDAG_04192
  Check point factors
   HRAD17(Rad24)-RFC complex
    VDAG_04192
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_lid_RFC1 AAA_22 RuvB_N AAA_assoc_2 AAA_11 SLFN-g3_helicase AAA_16 AAA_28 Mg_chelatase AAA_5 AAA_19 AAA_14 DNAX_ATPase_lid DUF815 AAA_24 AAA_7 AAA_30 ResIII Gp44_lid nSTAND6 AAA_23 bpMoxR AAA_2 RNA_helicase nSTAND3 AAA_3
Other DBs
NCBI-GeneID: 20705655
NCBI-ProteinID: XP_009648934
UniProt: G2X2Z9
LinkDB
Position
1
AA seq 380 aa
MASFFDLKARKQAAANGASSQKQDKSSQPPRAQPWVEKYRPKTLSDVTAQDHTVTILQRT
LQASNLPHMLFYGPPGTGKTSTILALAKELYGPELIKTRVLELNASDERGISIVREKVKN
FARMQLTNPTAEYKKRYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDQGNAKRRLEEIAKNEGVELEEGAVDALIKCSEGDLRKAI
TFLQSAARLVGATENADGDQSMDVDKKPITVKIIEDIAGVIPESTINKLTTAIRPQKSGD
TYQNVAGVVEEMVADGWSAGQVVSQLYQHIVYDEAIPDVQKNKIVLIFSEVDKRLVDGAD
EHLSILDLSLRISGIMAGRS
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggctagcttcttcgatctcaaagcaagaaagcaagcagcggccaatggcgcttcatcc
caaaagcaggacaagtcttcgcagccaccacgagcgcaaccgtgggtcgagaaataccgt
ccgaagaccctcagcgacgtcacggcccaggaccatactgtgactatcctgcagcgcact
ctgcaagcctccaatcttccacatatgctgttctacggcccgccaggtaccggcaaaacc
tcgaccatcctcgctcttgcaaaggagctctacggccccgaactcatcaagactcgcgtc
ctcgagctgaacgcttctgacgaacgaggtatctccatcgtacgcgagaaggtcaaaaac
tttgcacgcatgcaattgacgaatccgactgccgagtacaagaagcgatatccttgccct
cccttcaagatcatcatcctcgacgaggccgattcaatgacgcaagacgcgcaaagcgct
ctgcgtcgtacaatggaaacatacagcaagatcacacggttctgcctgatctgcaactac
gtcacacgcattattgacccccttgccagccgatgtagcaagtttcgtttcaagagcctg
gaccaggggaacgctaagcgaaggctggaagagattgcgaagaatgagggtgtcgagctc
gaagaaggtgctgttgatgccctgatcaaatgcagcgagggtgacttgcgaaaggccatc
acgtttctgcaaagtgccgcgcgacttgtcggggcgacggagaatgccgacggggaccag
tcgatggacgttgacaagaagccgattacggtcaagatcattgaagatattgctggtgtc
atccccgagtcaacgatcaacaaattgacaactgcaatccgtcctcaaaagtccggggac
acgtatcagaatgtcgccggtgtagttgaggagatggtggccgatggctggagtgcaggc
caggttgtctctcaactctaccagcatatcgtttacgacgaggccattcctgacgttcag
aaaaacaagatagttctcatcttttccgaggtagacaagcggcttgttgacggtgcagac
gagcatctttcaatccttgacctttcgctcaggatatcgggaatcatggccggccggagt
taa

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