Verticillium dahliae: VDAG_04192
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Entry
VDAG_04192 CDS
T03450
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
vda
Verticillium dahliae
Pathway
vda03030
DNA replication
vda03410
Base excision repair
vda03420
Nucleotide excision repair
vda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VDAG_04192
03410 Base excision repair
VDAG_04192
03420 Nucleotide excision repair
VDAG_04192
03430 Mismatch repair
VDAG_04192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vda03032
]
VDAG_04192
03036 Chromosome and associated proteins [BR:
vda03036
]
VDAG_04192
03400 DNA repair and recombination proteins [BR:
vda03400
]
VDAG_04192
DNA replication proteins [BR:
vda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VDAG_04192
DNA Replication Termination Factors
ELG1-RFC complex
VDAG_04192
Chromosome and associated proteins [BR:
vda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VDAG_04192
DNA repair and recombination proteins [BR:
vda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VDAG_04192
Check point factors
HRAD17(Rad24)-RFC complex
VDAG_04192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
RuvB_N
AAA_assoc_2
AAA_11
SLFN-g3_helicase
AAA_16
AAA_28
Mg_chelatase
AAA_5
AAA_19
AAA_14
DNAX_ATPase_lid
DUF815
AAA_24
AAA_7
AAA_30
ResIII
Gp44_lid
nSTAND6
AAA_23
bpMoxR
AAA_2
RNA_helicase
nSTAND3
AAA_3
Motif
Other DBs
NCBI-GeneID:
20705655
NCBI-ProteinID:
XP_009648934
UniProt:
G2X2Z9
LinkDB
All DBs
Position
1
AA seq
380 aa
AA seq
DB search
MASFFDLKARKQAAANGASSQKQDKSSQPPRAQPWVEKYRPKTLSDVTAQDHTVTILQRT
LQASNLPHMLFYGPPGTGKTSTILALAKELYGPELIKTRVLELNASDERGISIVREKVKN
FARMQLTNPTAEYKKRYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLICNY
VTRIIDPLASRCSKFRFKSLDQGNAKRRLEEIAKNEGVELEEGAVDALIKCSEGDLRKAI
TFLQSAARLVGATENADGDQSMDVDKKPITVKIIEDIAGVIPESTINKLTTAIRPQKSGD
TYQNVAGVVEEMVADGWSAGQVVSQLYQHIVYDEAIPDVQKNKIVLIFSEVDKRLVDGAD
EHLSILDLSLRISGIMAGRS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctagcttcttcgatctcaaagcaagaaagcaagcagcggccaatggcgcttcatcc
caaaagcaggacaagtcttcgcagccaccacgagcgcaaccgtgggtcgagaaataccgt
ccgaagaccctcagcgacgtcacggcccaggaccatactgtgactatcctgcagcgcact
ctgcaagcctccaatcttccacatatgctgttctacggcccgccaggtaccggcaaaacc
tcgaccatcctcgctcttgcaaaggagctctacggccccgaactcatcaagactcgcgtc
ctcgagctgaacgcttctgacgaacgaggtatctccatcgtacgcgagaaggtcaaaaac
tttgcacgcatgcaattgacgaatccgactgccgagtacaagaagcgatatccttgccct
cccttcaagatcatcatcctcgacgaggccgattcaatgacgcaagacgcgcaaagcgct
ctgcgtcgtacaatggaaacatacagcaagatcacacggttctgcctgatctgcaactac
gtcacacgcattattgacccccttgccagccgatgtagcaagtttcgtttcaagagcctg
gaccaggggaacgctaagcgaaggctggaagagattgcgaagaatgagggtgtcgagctc
gaagaaggtgctgttgatgccctgatcaaatgcagcgagggtgacttgcgaaaggccatc
acgtttctgcaaagtgccgcgcgacttgtcggggcgacggagaatgccgacggggaccag
tcgatggacgttgacaagaagccgattacggtcaagatcattgaagatattgctggtgtc
atccccgagtcaacgatcaacaaattgacaactgcaatccgtcctcaaaagtccggggac
acgtatcagaatgtcgccggtgtagttgaggagatggtggccgatggctggagtgcaggc
caggttgtctctcaactctaccagcatatcgtttacgacgaggccattcctgacgttcag
aaaaacaagatagttctcatcttttccgaggtagacaagcggcttgttgacggtgcagac
gagcatctttcaatccttgacctttcgctcaggatatcgggaatcatggccggccggagt
taa
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